Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Chemical Bonds

 Molecule : L6T    

Bonds between two atoms of the molecule

Total Number of Bonds: 82


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 OAU CAT O C sing 1.43 N N
2 OAS CAR O C sing 1.43 N N
3 CAT CAR C C sing 1.53 N N
4 CAT CAV C C sing 1.53 N N
5 CAR CAO C C sing 1.53 N N
6 CAV OAW C O sing 1.43 N N
7 CAV CAA C C sing 1.53 N N
8 CAO CAP C C sing 1.53 N N
9 CAO OAN C O sing 1.43 N N
10 CAP OAQ C O sing 1.43 N N
11 OAN CAA O C sing 1.43 N N
12 CAA O1 C O sing 1.43 N N
13 O1 C1 O C sing 1.43 N N
14 O2 C2 O C sing 1.43 N N
15 C3 O3 C O sing 1.43 N N
16 C3 C2 C C sing 1.53 N N
17 C3 C4 C C sing 1.53 N N
18 C2 C1 C C sing 1.53 N N
19 C1 O5 C O sing 1.43 N N
20 O4 C4 O C sing 1.43 N N
21 C5 C4 C C sing 1.53 N N
22 C5 O5 C O sing 1.43 N N
23 C5 C6 C C sing 1.53 N N
24 C6 O6 C O sing 1.43 N N
25 O6 CAX O C sing 1.43 N N
26 CAX CAY C C sing 1.53 N N
27 CAY CAZ C C sing 1.53 N N
28 CAZ CBA C C sing 1.53 N N
29 CBA CBB C C sing 1.53 N N
30 CBB CBC C C sing 1.53 N N
31 CBC CBD C C sing 1.53 N N
32 CBD CBE C C sing 1.53 N N
33 CBE CBF C C sing 1.53 N N
34 CBF CBG C C sing 1.53 N N
35 CBG CBH C C sing 1.53 N N
36 CBH CBI C C sing 1.53 N N
37 C1 H1 C H sing 1.09 N N
38 C2 H21 C H sing 1.09 N N
39 C3 H31 C H sing 1.09 N N
40 C4 H41 C H sing 1.09 N N
41 C5 H5 C H sing 1.09 N N
42 C6 H62 C H sing 1.09 N N
43 C6 H61 C H sing 1.09 N N
44 CAA HAA C H sing 1.09 N N
45 CAO HAO C H sing 1.09 N N
46 CAP HAP C H sing 1.09 N N
47 CAP H63 C H sing 1.09 N N
48 CAR HAR C H sing 1.09 N N
49 CAT HAT C H sing 1.09 N N
50 CAV HAV C H sing 1.09 N N
51 CAX HAX C H sing 1.09 N N
52 CAX H64 C H sing 1.09 N N
53 CAY H65 C H sing 1.09 N N
54 CAY HAY C H sing 1.09 N N
55 CAZ H66 C H sing 1.09 N N
56 CAZ HAZ C H sing 1.09 N N
57 CBA H67 C H sing 1.09 N N
58 CBA HBA C H sing 1.09 N N
59 CBB H68 C H sing 1.09 N N
60 CBB HBB C H sing 1.09 N N
61 CBC HBC C H sing 1.09 N N
62 CBC H69 C H sing 1.09 N N
63 CBD H7A C H sing 1.09 N N
64 CBD HBD C H sing 1.09 N N
65 CBE HBE C H sing 1.09 N N
66 CBE H7B C H sing 1.09 N N
67 CBF H7C C H sing 1.09 N N
68 CBF HBF C H sing 1.09 N N
69 CBG H7D C H sing 1.09 N N
70 CBG HBG C H sing 1.09 N N
71 CBH HBH C H sing 1.09 N N
72 CBH H7E C H sing 1.09 N N
73 CBI H7G C H sing 1.09 N N
74 CBI HBI C H sing 1.09 N N
75 CBI H7F C H sing 1.09 N N
76 O2 H22 O H sing 0.97 N N
77 O3 H32 O H sing 0.97 N N
78 O4 H42 O H sing 0.97 N N
79 OAQ HAQ O H sing 0.97 N N
80 OAS HAS O H sing 0.97 N N
81 OAU HAU O H sing 0.97 N N
82 OAW HAW O H sing 0.97 N N