data_L6T
#
_chem_comp.id L6T
_chem_comp.name "alpha-D-glucopyranosyl 6-O-dodecyl-alpha-D-glucopyranoside"
_chem_comp.type saccharide
_chem_comp.pdbx_type ATOMS
_chem_comp.formula "C24 H46 O11"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2018-07-23
_chem_comp.pdbx_modified_date 2018-12-21
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 510.615
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code L6T
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag Y
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code ?
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
L6T C1 C1 C 0 1 N N R N N N ? ? ? 3.837 -0.783 1.100 C1 L6T 1
L6T C2 C2 C 0 1 N N R N N N ? ? ? 4.963 -1.820 1.066 C2 L6T 2
L6T C3 C3 C 0 1 N N S N N N ? ? ? 4.802 -2.695 -0.181 C3 L6T 3
L6T C4 C4 C 0 1 N N S N N N ? ? ? 3.414 -3.343 -0.161 C4 L6T 4
L6T C5 C5 C 0 1 N N R N N N ? ? ? 2.349 -2.247 -0.079 C5 L6T 5
L6T C6 C6 C 0 1 N N N N N N ? ? ? 0.962 -2.888 0.002 C6 L6T 6
L6T CAA C7 C 0 1 N N R N N N ? ? ? 3.078 1.209 0.003 CAA L6T 7
L6T CAO C8 C 0 1 N N R N N N ? ? ? 4.878 2.580 0.797 CAO L6T 8
L6T CAP C9 C 0 1 N N N N N N ? ? ? 5.276 3.518 1.938 CAP L6T 9
L6T CAR C10 C 0 1 N N S N N N ? ? ? 4.955 3.333 -0.534 CAR L6T 10
L6T CAT C11 C 0 1 N N S N N N ? ? ? 4.498 2.406 -1.664 CAT L6T 11
L6T CAV C12 C 0 1 N N R N N N ? ? ? 3.082 1.907 -1.359 CAV L6T 12
L6T CAX C13 C 0 1 N N N N N N ? ? ? -1.377 -2.363 0.030 CAX L6T 13
L6T CAY C14 C 0 1 N N N N N N ? ? ? -2.358 -1.190 -0.022 CAY L6T 14
L6T CAZ C15 C 0 1 N N N N N N ? ? ? -3.791 -1.720 0.053 CAZ L6T 15
L6T CBA C16 C 0 1 N N N N N N ? ? ? -4.772 -0.547 0.001 CBA L6T 16
L6T CBB C17 C 0 1 N N N N N N ? ? ? -6.205 -1.077 0.076 CBB L6T 17
L6T CBC C18 C 0 1 N N N N N N ? ? ? -7.186 0.096 0.024 CBC L6T 18
L6T CBD C19 C 0 1 N N N N N N ? ? ? -8.619 -0.434 0.099 CBD L6T 19
L6T CBE C20 C 0 1 N N N N N N ? ? ? -9.600 0.739 0.047 CBE L6T 20
L6T CBF C21 C 0 1 N N N N N N ? ? ? -11.033 0.209 0.122 CBF L6T 21
L6T CBG C22 C 0 1 N N N N N N ? ? ? -12.014 1.382 0.070 CBG L6T 22
L6T CBH C23 C 0 1 N N N N N N ? ? ? -13.448 0.852 0.144 CBH L6T 23
L6T CBI C24 C 0 1 N N N N N N ? ? ? -14.429 2.025 0.092 CBI L6T 24
L6T O1 O1 O 0 1 N N N N N N ? ? ? 3.939 0.069 -0.043 O1 L6T 25
L6T O2 O2 O 0 1 N N N N N N ? ? ? 6.226 -1.153 1.023 O2 L6T 26
L6T O3 O3 O 0 1 N N N N N N ? ? ? 5.805 -3.713 -0.183 O3 L6T 27
L6T O4 O4 O 0 1 N N N N N N ? ? ? 3.226 -4.106 -1.355 O4 L6T 28
L6T O5 O5 O 0 1 N N N N N N ? ? ? 2.574 -1.451 1.086 O5 L6T 29
L6T O6 O6 O 0 1 N N N N N N ? ? ? -0.038 -1.868 -0.040 O6 L6T 30
L6T OAN O7 O 0 1 N N N N N N ? ? ? 3.542 2.117 1.004 OAN L6T 31
L6T OAQ O8 O 0 1 N N N N N N ? ? ? 5.316 2.785 3.165 OAQ L6T 32
L6T OAS O9 O 0 1 N N N N N N ? ? ? 6.302 3.749 -0.770 OAS L6T 33
L6T OAU O10 O 0 1 N N N N N N ? ? ? 4.497 3.123 -2.900 OAU L6T 34
L6T OAW O11 O 0 1 N N N N N N ? ? ? 2.673 0.984 -2.370 OAW L6T 35
L6T H1 H1 H 0 1 N N N N N N ? ? ? 3.922 -0.185 2.008 H1 L6T 36
L6T H21 H2 H 0 1 N N N N N N ? ? ? 4.910 -2.444 1.958 H21 L6T 37
L6T H31 H3 H 0 1 N N N N N N ? ? ? 4.905 -2.079 -1.074 H31 L6T 38
L6T H41 H4 H 0 1 N N N N N N ? ? ? 3.330 -3.998 0.706 H41 L6T 39
L6T H5 H5 H 0 1 N N N N N N ? ? ? 2.407 -1.617 -0.967 H5 L6T 40
L6T H62 H6 H 0 1 N N N N N N ? ? ? 0.825 -3.566 -0.841 H62 L6T 41
L6T H61 H7 H 0 1 N N N N N N ? ? ? 0.873 -3.446 0.934 H61 L6T 42
L6T HAA H8 H 0 1 N N N N N N ? ? ? 2.064 0.889 0.245 HAA L6T 43
L6T HAO H9 H 0 1 N N N N N N ? ? ? 5.558 1.728 0.772 HAO L6T 44
L6T HAP H10 H 0 1 N N N N N N ? ? ? 6.260 3.940 1.735 HAP L6T 45
L6T H63 H11 H 0 1 N N N N N N ? ? ? 4.545 4.322 2.019 H63 L6T 46
L6T HAR H12 H 0 1 N N N N N N ? ? ? 4.306 4.208 -0.495 HAR L6T 47
L6T HAT H13 H 0 1 N N N N N N ? ? ? 5.176 1.556 -1.735 HAT L6T 48
L6T HAV H14 H 0 1 N N N N N N ? ? ? 2.395 2.753 -1.337 HAV L6T 49
L6T HAX H15 H 0 1 N N N N N N ? ? ? -1.514 -2.910 0.963 HAX L6T 50
L6T H64 H16 H 0 1 N N N N N N ? ? ? -1.562 -3.029 -0.812 H64 L6T 51
L6T H65 H17 H 0 1 N N N N N N ? ? ? -2.172 -0.524 0.821 H65 L6T 52
L6T HAY H18 H 0 1 N N N N N N ? ? ? -2.221 -0.643 -0.954 HAY L6T 53
L6T H66 H19 H 0 1 N N N N N N ? ? ? -3.976 -2.386 -0.789 H66 L6T 54
L6T HAZ H20 H 0 1 N N N N N N ? ? ? -3.928 -2.267 0.986 HAZ L6T 55
L6T H67 H21 H 0 1 N N N N N N ? ? ? -4.586 0.119 0.844 H67 L6T 56
L6T HBA H22 H 0 1 N N N N N N ? ? ? -4.635 0.000 -0.932 HBA L6T 57
L6T H68 H23 H 0 1 N N N N N N ? ? ? -6.391 -1.743 -0.767 H68 L6T 58
L6T HBB H24 H 0 1 N N N N N N ? ? ? -6.342 -1.624 1.009 HBB L6T 59
L6T HBC H25 H 0 1 N N N N N N ? ? ? -7.001 0.762 0.867 HBC L6T 60
L6T H69 H26 H 0 1 N N N N N N ? ? ? -7.049 0.643 -0.909 H69 L6T 61
L6T H7A H27 H 0 1 N N N N N N ? ? ? -8.805 -1.100 -0.744 H7A L6T 62
L6T HBD H28 H 0 1 N N N N N N ? ? ? -8.756 -0.981 1.031 HBD L6T 63
L6T HBE H29 H 0 1 N N N N N N ? ? ? -9.415 1.405 0.889 HBE L6T 64
L6T H7B H30 H 0 1 N N N N N N ? ? ? -9.463 1.286 -0.886 H7B L6T 65
L6T H7C H31 H 0 1 N N N N N N ? ? ? -11.219 -0.457 -0.721 H7C L6T 66
L6T HBF H32 H 0 1 N N N N N N ? ? ? -11.170 -0.338 1.054 HBF L6T 67
L6T H7D H33 H 0 1 N N N N N N ? ? ? -11.829 2.049 0.912 H7D L6T 68
L6T HBG H34 H 0 1 N N N N N N ? ? ? -11.877 1.929 -0.863 HBG L6T 69
L6T HBH H35 H 0 1 N N N N N N ? ? ? -13.633 0.186 -0.698 HBH L6T 70
L6T H7E H36 H 0 1 N N N N N N ? ? ? -13.585 0.305 1.077 H7E L6T 71
L6T H7G H37 H 0 1 N N N N N N ? ? ? -14.243 2.692 0.935 H7G L6T 72
L6T HBI H38 H 0 1 N N N N N N ? ? ? -14.292 2.572 -0.840 HBI L6T 73
L6T H7F H39 H 0 1 N N N N N N ? ? ? -15.450 1.648 0.146 H7F L6T 74
L6T H22 H40 H 0 1 N N N N N N ? ? ? 6.392 -0.577 1.782 H22 L6T 75
L6T H32 H41 H 0 1 N N N N N N ? ? ? 6.710 -3.373 -0.189 H32 L6T 76
L6T H42 H42 H 0 1 N N N N N N ? ? ? 3.871 -4.817 -1.473 H42 L6T 77
L6T HAQ H43 H 0 1 N N N N N N ? ? ? 5.561 3.318 3.933 HAQ L6T 78
L6T HAS H44 H 0 1 N N N N N N ? ? ? 6.424 4.233 -1.598 HAS L6T 79
L6T HAU H45 H 0 1 N N N N N N ? ? ? 4.217 2.596 -3.661 HAU L6T 80
L6T HAW H46 H 0 1 N N N N N N ? ? ? 1.784 0.627 -2.240 HAW L6T 81
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
L6T OAU CAT SING N N 1
L6T OAS CAR SING N N 2
L6T CAT CAR SING N N 3
L6T CAT CAV SING N N 4
L6T CAR CAO SING N N 5
L6T CAV OAW SING N N 6
L6T CAV CAA SING N N 7
L6T CAO CAP SING N N 8
L6T CAO OAN SING N N 9
L6T CAP OAQ SING N N 10
L6T OAN CAA SING N N 11
L6T CAA O1 SING N N 12
L6T O1 C1 SING N N 13
L6T O2 C2 SING N N 14
L6T C3 O3 SING N N 15
L6T C3 C2 SING N N 16
L6T C3 C4 SING N N 17
L6T C2 C1 SING N N 18
L6T C1 O5 SING N N 19
L6T O4 C4 SING N N 20
L6T C5 C4 SING N N 21
L6T C5 O5 SING N N 22
L6T C5 C6 SING N N 23
L6T C6 O6 SING N N 24
L6T O6 CAX SING N N 25
L6T CAX CAY SING N N 26
L6T CAY CAZ SING N N 27
L6T CAZ CBA SING N N 28
L6T CBA CBB SING N N 29
L6T CBB CBC SING N N 30
L6T CBC CBD SING N N 31
L6T CBD CBE SING N N 32
L6T CBE CBF SING N N 33
L6T CBF CBG SING N N 34
L6T CBG CBH SING N N 35
L6T CBH CBI SING N N 36
L6T C1 H1 SING N N 37
L6T C2 H21 SING N N 38
L6T C3 H31 SING N N 39
L6T C4 H41 SING N N 40
L6T C5 H5 SING N N 41
L6T C6 H62 SING N N 42
L6T C6 H61 SING N N 43
L6T CAA HAA SING N N 44
L6T CAO HAO SING N N 45
L6T CAP HAP SING N N 46
L6T CAP H63 SING N N 47
L6T CAR HAR SING N N 48
L6T CAT HAT SING N N 49
L6T CAV HAV SING N N 50
L6T CAX HAX SING N N 51
L6T CAX H64 SING N N 52
L6T CAY H65 SING N N 53
L6T CAY HAY SING N N 54
L6T CAZ H66 SING N N 55
L6T CAZ HAZ SING N N 56
L6T CBA H67 SING N N 57
L6T CBA HBA SING N N 58
L6T CBB H68 SING N N 59
L6T CBB HBB SING N N 60
L6T CBC HBC SING N N 61
L6T CBC H69 SING N N 62
L6T CBD H7A SING N N 63
L6T CBD HBD SING N N 64
L6T CBE HBE SING N N 65
L6T CBE H7B SING N N 66
L6T CBF H7C SING N N 67
L6T CBF HBF SING N N 68
L6T CBG H7D SING N N 69
L6T CBG HBG SING N N 70
L6T CBH HBH SING N N 71
L6T CBH H7E SING N N 72
L6T CBI H7G SING N N 73
L6T CBI HBI SING N N 74
L6T CBI H7F SING N N 75
L6T O2 H22 SING N N 76
L6T O3 H32 SING N N 77
L6T O4 H42 SING N N 78
L6T OAQ HAQ SING N N 79
L6T OAS HAS SING N N 80
L6T OAU HAU SING N N 81
L6T OAW HAW SING N N 82
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
L6T SMILES ACDLabs 12.01 C1(OC(C(C(C1O)O)O)COCCCCCCCCCCCC)OC2C(C(C(C(CO)O2)O)O)O
L6T InChI InChI 1.03 InChI=1S/C24H46O11/c1-2-3-4-5-6-7-8-9-10-11-12-32-14-16-18(27)20(29)22(31)24(34-16)35-23-21(30)19(28)17(26)15(13-25)33-23/h15-31H,2-14H2,1H3/t15-,16-,17-,18-,19+,20+,21-,22-,23-,24-/m1/s1
L6T InChIKey InChI 1.03 HIJNTEBBIQHGEK-FXPCSOOLSA-N
L6T SMILES_CANONICAL CACTVS 3.385 CCCCCCCCCCCCOC[C@H]1O[C@H](O[C@H]2O[C@H](CO)[C@@H](O)[C@H](O)[C@H]2O)[C@H](O)[C@@H](O)[C@@H]1O
L6T SMILES CACTVS 3.385 CCCCCCCCCCCCOC[CH]1O[CH](O[CH]2O[CH](CO)[CH](O)[CH](O)[CH]2O)[CH](O)[CH](O)[CH]1O
L6T SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 CCCCCCCCCCCCOC[C@@H]1[C@H]([C@@H]([C@H]([C@H](O1)O[C@@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO)O)O)O)O)O)O
L6T SMILES "OpenEye OEToolkits" 2.0.6 CCCCCCCCCCCCOCC1C(C(C(C(O1)OC2C(C(C(C(O2)CO)O)O)O)O)O)O
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
L6T "SYSTEMATIC NAME" ACDLabs 12.01 "alpha-D-glucopyranosyl 6-O-dodecyl-alpha-D-glucopyranoside"
L6T "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 (2~{R},3~{R},4~{S},5~{S},6~{R})-2-[(2~{R},3~{R},4~{S},5~{S},6~{R})-6-(dodecoxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
L6T 'Create component' 2018-07-23 RCSB
L6T 'Initial release' 2018-12-26 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
L6T C1 C 23.785 -1.500 1
L6T C2 C 23.785 -3.000 2
L6T C3 C 22.486 -3.750 3
L6T C4 C 21.187 -3.000 4
L6T C5 C 21.187 -1.500 5
L6T C6 C 19.887 -0.750 6
L6T CAA C 25.084 0.750 7
L6T CAO C 23.785 3.000 8
L6T CAP C 22.486 3.750 9
L6T CAR C 25.084 3.750 10
L6T CAT C 26.383 3.000 11
L6T CAV C 26.383 1.500 12
L6T CAX C 17.290 -0.750 13
L6T CAY C 15.990 -1.500 14
L6T CAZ C 14.691 -0.750 15
L6T CBA C 13.392 -1.500 16
L6T CBB C 12.093 -0.750 17
L6T CBC C 10.794 -1.500 18
L6T CBD C 9.495 -0.750 19
L6T CBE C 8.196 -1.500 20
L6T CBF C 6.897 -0.750 21
L6T CBG C 5.598 -1.500 22
L6T CBH C 4.299 -0.750 23
L6T CBI C 3.000 -1.500 24
L6T O1 O 25.084 -0.750 25
L6T O2 O 25.084 -3.750 26
L6T O3 O 22.486 -5.250 27
L6T O4 O 19.887 -3.750 28
L6T O5 O 22.486 -0.750 29
L6T O6 O 18.588 -1.500 30
L6T OAN O 23.785 1.500 31
L6T OAQ O 22.486 5.250 32
L6T OAS O 25.084 5.250 33
L6T OAU O 27.682 3.750 34
L6T OAW O 27.682 0.750 35
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
L6T CAT OAU SINGLE BEGINDASH 1
L6T CAR OAS SINGLE BEGINWEDGE 2
L6T CAT CAR SINGLE NONE 3
L6T CAT CAV SINGLE NONE 4
L6T CAR CAO SINGLE NONE 5
L6T CAV OAW SINGLE BEGINWEDGE 6
L6T CAV CAA SINGLE NONE 7
L6T CAO CAP SINGLE BEGINDASH 8
L6T CAO OAN SINGLE NONE 9
L6T CAP OAQ SINGLE NONE 10
L6T OAN CAA SINGLE NONE 11
L6T CAA O1 SINGLE BEGINWEDGE 12
L6T C1 O1 SINGLE BEGINDASH 13
L6T C2 O2 SINGLE BEGINDASH 14
L6T C3 O3 SINGLE BEGINWEDGE 15
L6T C3 C2 SINGLE NONE 16
L6T C3 C4 SINGLE NONE 17
L6T C2 C1 SINGLE NONE 18
L6T C1 O5 SINGLE NONE 19
L6T C4 O4 SINGLE BEGINDASH 20
L6T C5 C4 SINGLE NONE 21
L6T C5 O5 SINGLE NONE 22
L6T C5 C6 SINGLE BEGINWEDGE 23
L6T C6 O6 SINGLE NONE 24
L6T O6 CAX SINGLE NONE 25
L6T CAX CAY SINGLE NONE 26
L6T CAY CAZ SINGLE NONE 27
L6T CAZ CBA SINGLE NONE 28
L6T CBA CBB SINGLE NONE 29
L6T CBB CBC SINGLE NONE 30
L6T CBC CBD SINGLE NONE 31
L6T CBD CBE SINGLE NONE 32
L6T CBE CBF SINGLE NONE 33
L6T CBF CBG SINGLE NONE 34
L6T CBG CBH SINGLE NONE 35
L6T CBH CBI SINGLE NONE 36
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
L6T MurckoScaffold S1 scaffold 'C1CC[C@@H](O[C@@H]2CCCCO2)OC1' InChI=1S/C10H18O3/c1-3-7-11-9(5-1)13-10-6-2-4-8-12-10/h9-10H,1-8H2/t9-,10-/m1/s1 HUHXLHLWASNVDB-NXEZZACHSA-N
L6T pyranose F1 fragment OC1CCCCO1 InChI=1S/C5H10O2/c6-5-3-1-2-4-7-5/h5-6H,1-4H2 CELWCAITJAEQNL-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
L6T C1 S1 1
L6T C2 S1 1
L6T C3 S1 1
L6T C4 S1 1
L6T C5 S1 1
L6T CAA S1 1
L6T CAO S1 1
L6T CAR S1 1
L6T CAT S1 1
L6T CAV S1 1
L6T O1 S1 1
L6T O5 S1 1
L6T OAN S1 1
L6T C4 F1 1
L6T C5 F1 1
L6T O5 F1 1
L6T C1 F1 1
L6T C2 F1 1
L6T C3 F1 1
L6T O1 F1 1
L6T CAR F1 2
L6T CAO F1 2
L6T OAN F1 2
L6T CAA F1 2
L6T CAV F1 2
L6T CAT F1 2
L6T O1 F1 2
#
_pdbe_chem_comp_rdkit_properties.comp_id L6T
_pdbe_chem_comp_rdkit_properties.exactmw 510.304
_pdbe_chem_comp_rdkit_properties.amw 510.621
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 11
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 7
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 24
_pdbe_chem_comp_rdkit_properties.NumHBD 7
_pdbe_chem_comp_rdkit_properties.NumHBA 11
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 35
_pdbe_chem_comp_rdkit_properties.NumAtoms 81
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 11
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 1
_pdbe_chem_comp_rdkit_properties.NumRings 2
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 2
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 10
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 272.370
_pdbe_chem_comp_rdkit_properties.tpsa 178.530
_pdbe_chem_comp_rdkit_properties.CrippenClogP -0.452
_pdbe_chem_comp_rdkit_properties.CrippenMR 124.197
_pdbe_chem_comp_rdkit_properties.chi0v 16.491
_pdbe_chem_comp_rdkit_properties.chi1v 8.312
_pdbe_chem_comp_rdkit_properties.chi2v 3.084
_pdbe_chem_comp_rdkit_properties.chi3v 3.084
_pdbe_chem_comp_rdkit_properties.chi4v 1.694
_pdbe_chem_comp_rdkit_properties.chi0n 62.491
_pdbe_chem_comp_rdkit_properties.chi1n 30.670
_pdbe_chem_comp_rdkit_properties.chi2n 3.084
_pdbe_chem_comp_rdkit_properties.chi3n 3.084
_pdbe_chem_comp_rdkit_properties.chi4n 1.694
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -0.440
_pdbe_chem_comp_rdkit_properties.kappa1 5.851
_pdbe_chem_comp_rdkit_properties.kappa2 16.412
_pdbe_chem_comp_rdkit_properties.kappa3 9.423
_pdbe_chem_comp_rdkit_properties.Phi 2.744
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
L6T UniChem PubChem 101433258
L6T UniChem Nikkaji J2.511.551A
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
L6T C1 -4.382 -1.534 -0.029 ETKDGv3 1
L6T C2 -4.189 -2.828 0.785 ETKDGv3 2
L6T C3 -3.070 -2.648 1.826 ETKDGv3 3
L6T C4 -1.807 -2.106 1.137 ETKDGv3 4
L6T C5 -2.157 -0.845 0.307 ETKDGv3 5
L6T C6 -0.928 -0.308 -0.436 ETKDGv3 6
L6T CAA -5.935 0.235 0.196 ETKDGv3 7
L6T CAO -7.806 1.570 0.741 ETKDGv3 8
L6T CAP -8.979 0.628 1.065 ETKDGv3 9
L6T CAR -7.788 2.002 -0.757 ETKDGv3 10
L6T CAT -6.353 2.375 -1.166 ETKDGv3 11
L6T CAV -5.390 1.189 -0.906 ETKDGv3 12
L6T CAX 0.794 -0.896 -1.885 ETKDGv3 13
L6T CAY 1.911 -1.603 -1.111 ETKDGv3 14
L6T CAZ 3.288 -1.270 -1.697 ETKDGv3 15
L6T CBA 4.404 -1.967 -0.905 ETKDGv3 16
L6T CBB 5.791 -1.806 -1.554 ETKDGv3 17
L6T CBC 6.286 -0.354 -1.678 ETKDGv3 18
L6T CBD 6.423 0.351 -0.321 ETKDGv3 19
L6T CBE 7.110 1.716 -0.478 ETKDGv3 20
L6T CBF 7.087 2.553 0.814 ETKDGv3 21
L6T CBG 7.812 1.915 2.013 ETKDGv3 22
L6T CBH 9.310 1.694 1.758 ETKDGv3 23
L6T CBI 10.021 1.232 3.027 ETKDGv3 24
L6T O1 -4.887 -0.497 0.810 ETKDGv3 25
L6T O2 -5.397 -3.159 1.420 ETKDGv3 26
L6T O3 -2.770 -3.880 2.431 ETKDGv3 27
L6T O4 -0.805 -1.835 2.086 ETKDGv3 28
L6T O5 -3.168 -1.135 -0.648 ETKDGv3 29
L6T O6 -0.467 -1.270 -1.364 ETKDGv3 30
L6T OAN -6.581 0.998 1.198 ETKDGv3 31
L6T OAQ -10.206 1.284 0.890 ETKDGv3 32
L6T OAS -8.644 3.102 -0.936 ETKDGv3 33
L6T OAU -6.306 2.719 -2.527 ETKDGv3 34
L6T OAW -4.109 1.673 -0.586 ETKDGv3 35
L6T H1 -5.086 -1.805 -0.851 ETKDGv3 36
L6T H21 -3.897 -3.638 0.073 ETKDGv3 37
L6T H31 -3.402 -1.913 2.599 ETKDGv3 38
L6T H41 -1.423 -2.891 0.448 ETKDGv3 39
L6T H5 -2.493 -0.033 0.992 ETKDGv3 40
L6T H62 -0.143 -0.044 0.310 ETKDGv3 41
L6T H61 -1.223 0.621 -0.975 ETKDGv3 42
L6T HAA -6.678 -0.471 -0.247 ETKDGv3 43
L6T HAO -7.955 2.490 1.349 ETKDGv3 44
L6T HAP -8.904 0.315 2.128 ETKDGv3 45
L6T H63 -8.932 -0.297 0.446 ETKDGv3 46
L6T HAR -8.127 1.148 -1.393 ETKDGv3 47
L6T HAT -6.033 3.246 -0.544 ETKDGv3 48
L6T HAV -5.299 0.591 -1.839 ETKDGv3 49
L6T HAX 0.832 -1.228 -2.945 ETKDGv3 50
L6T H64 0.960 0.208 -1.894 ETKDGv3 51
L6T H65 1.878 -1.288 -0.045 ETKDGv3 52
L6T HAY 1.742 -2.702 -1.156 ETKDGv3 53
L6T H66 3.326 -1.598 -2.759 ETKDGv3 54
L6T HAZ 3.435 -0.170 -1.656 ETKDGv3 55
L6T H67 4.422 -1.592 0.140 ETKDGv3 56
L6T HBA 4.182 -3.056 -0.855 ETKDGv3 57
L6T H68 5.767 -2.260 -2.569 ETKDGv3 58
L6T HBB 6.529 -2.387 -0.958 ETKDGv3 59
L6T HBC 7.283 -0.380 -2.171 ETKDGv3 60
L6T H69 5.611 0.227 -2.343 ETKDGv3 61
L6T H7A 5.416 0.505 0.122 ETKDGv3 62
L6T HBD 7.023 -0.290 0.359 ETKDGv3 63
L6T HBE 8.154 1.579 -0.829 ETKDGv3 64
L6T H7B 6.577 2.297 -1.263 ETKDGv3 65
L6T H7C 7.546 3.543 0.602 ETKDGv3 66
L6T HBF 6.029 2.742 1.101 ETKDGv3 67
L6T H7D 7.327 0.955 2.291 ETKDGv3 68
L6T HBG 7.693 2.601 2.880 ETKDGv3 69
L6T HBH 9.451 0.917 0.978 ETKDGv3 70
L6T H7E 9.777 2.640 1.408 ETKDGv3 71
L6T H7G 9.934 2.004 3.822 ETKDGv3 72
L6T HBI 11.097 1.067 2.811 ETKDGv3 73
L6T H7F 9.581 0.279 3.390 ETKDGv3 74
L6T H22 -5.380 -4.138 1.583 ETKDGv3 75
L6T H32 -3.429 -4.012 3.161 ETKDGv3 76
L6T H42 -1.140 -1.114 2.681 ETKDGv3 77
L6T HAQ -10.463 1.164 -0.062 ETKDGv3 78
L6T HAS -8.936 3.093 -1.884 ETKDGv3 79
L6T HAU -6.571 3.674 -2.596 ETKDGv3 80
L6T HAW -4.166 2.106 0.306 ETKDGv3 81
#