Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : L6T

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 81


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 R N N 0 3.837 -0.783 1.1
2 C2 C C2 R N N 0 4.963 -1.82 1.066
3 C3 C C3 S N N 0 4.802 -2.695 -0.181
4 C4 C C4 S N N 0 3.414 -3.343 -0.161
5 C5 C C5 R N N 0 2.349 -2.247 -0.079
6 C6 C C6 N N N 0 0.962 -2.888 0.002
7 CAA C C7 R N N 0 3.078 1.209 0.003
8 CAO C C8 R N N 0 4.878 2.58 0.797
9 CAP C C9 N N N 0 5.276 3.518 1.938
10 CAR C C10 S N N 0 4.955 3.333 -0.534
11 CAT C C11 S N N 0 4.498 2.406 -1.664
12 CAV C C12 R N N 0 3.082 1.907 -1.359
13 CAX C C13 N N N 0 -1.377 -2.363 0.03
14 CAY C C14 N N N 0 -2.358 -1.19 -0.022
15 CAZ C C15 N N N 0 -3.791 -1.72 0.053
16 CBA C C16 N N N 0 -4.772 -0.547 0.001
17 CBB C C17 N N N 0 -6.205 -1.077 0.076
18 CBC C C18 N N N 0 -7.186 0.096 0.024
19 CBD C C19 N N N 0 -8.619 -0.434 0.099
20 CBE C C20 N N N 0 -9.6 0.739 0.047
21 CBF C C21 N N N 0 -11.033 0.209 0.122
22 CBG C C22 N N N 0 -12.014 1.382 0.07
23 CBH C C23 N N N 0 -13.448 0.852 0.144
24 CBI C C24 N N N 0 -14.429 2.025 0.092
25 O1 O O1 N N N 0 3.939 0.069 -0.043
26 O2 O O2 N N N 0 6.226 -1.153 1.023
27 O3 O O3 N N N 0 5.805 -3.713 -0.183
28 O4 O O4 N N N 0 3.226 -4.106 -1.355
29 O5 O O5 N N N 0 2.574 -1.451 1.086
30 O6 O O6 N N N 0 -0.038 -1.868 -0.04
31 OAN O O7 N N N 0 3.542 2.117 1.004
32 OAQ O O8 N N N 0 5.316 2.785 3.165
33 OAS O O9 N N N 0 6.302 3.749 -0.77
34 OAU O O10 N N N 0 4.497 3.123 -2.9
35 OAW O O11 N N N 0 2.673 0.984 -2.37
36 H1 H H1 N N N 0 3.922 -0.185 2.008
37 H21 H H2 N N N 0 4.91 -2.444 1.958
38 H31 H H3 N N N 0 4.905 -2.079 -1.074
39 H41 H H4 N N N 0 3.33 -3.998 0.706
40 H5 H H5 N N N 0 2.407 -1.617 -0.967
41 H62 H H6 N N N 0 0.825 -3.566 -0.841
42 H61 H H7 N N N 0 0.873 -3.446 0.934
43 HAA H H8 N N N 0 2.064 0.889 0.245
44 HAO H H9 N N N 0 5.558 1.728 0.772
45 HAP H H10 N N N 0 6.26 3.94 1.735
46 H63 H H11 N N N 0 4.545 4.322 2.019
47 HAR H H12 N N N 0 4.306 4.208 -0.495
48 HAT H H13 N N N 0 5.176 1.556 -1.735
49 HAV H H14 N N N 0 2.395 2.753 -1.337
50 HAX H H15 N N N 0 -1.514 -2.91 0.963
51 H64 H H16 N N N 0 -1.562 -3.029 -0.812
52 H65 H H17 N N N 0 -2.172 -0.524 0.821
53 HAY H H18 N N N 0 -2.221 -0.643 -0.954
54 H66 H H19 N N N 0 -3.976 -2.386 -0.789
55 HAZ H H20 N N N 0 -3.928 -2.267 0.986
56 H67 H H21 N N N 0 -4.586 0.119 0.844
57 HBA H H22 N N N 0 -4.635 0.0 -0.932
58 H68 H H23 N N N 0 -6.391 -1.743 -0.767
59 HBB H H24 N N N 0 -6.342 -1.624 1.009
60 HBC H H25 N N N 0 -7.001 0.762 0.867
61 H69 H H26 N N N 0 -7.049 0.643 -0.909
62 H7A H H27 N N N 0 -8.805 -1.1 -0.744
63 HBD H H28 N N N 0 -8.756 -0.981 1.031
64 HBE H H29 N N N 0 -9.415 1.405 0.889
65 H7B H H30 N N N 0 -9.463 1.286 -0.886
66 H7C H H31 N N N 0 -11.219 -0.457 -0.721
67 HBF H H32 N N N 0 -11.17 -0.338 1.054
68 H7D H H33 N N N 0 -11.829 2.049 0.912
69 HBG H H34 N N N 0 -11.877 1.929 -0.863
70 HBH H H35 N N N 0 -13.633 0.186 -0.698
71 H7E H H36 N N N 0 -13.585 0.305 1.077
72 H7G H H37 N N N 0 -14.243 2.692 0.935
73 HBI H H38 N N N 0 -14.292 2.572 -0.84
74 H7F H H39 N N N 0 -15.45 1.648 0.146
75 H22 H H40 N N N 0 6.392 -0.577 1.782
76 H32 H H41 N N N 0 6.71 -3.373 -0.189
77 H42 H H42 N N N 0 3.871 -4.817 -1.473
78 HAQ H H43 N N N 0 5.561 3.318 3.933
79 HAS H H44 N N N 0 6.424 4.233 -1.598
80 HAU H H45 N N N 0 4.217 2.596 -3.661
81 HAW H H46 N N N 0 1.784 0.627 -2.24