Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : KHP    

Bonds between two atoms of the molecule

Total Number of Bonds: 33


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O5 C5 O C sing 1.43 N N
2 O5 HO5 O H sing 0.97 N N
3 C5 C4 C C sing 1.53 N N
4 C5 H51 C H sing 1.09 N N
5 C5 H52 C H sing 1.09 N N
6 C4 O4 C O sing 1.44 N N
7 C4 C3 C C sing 1.55 N N
8 C4 H4 C H sing 1.09 N N
9 O4 C1 O C sing 1.43 N N
10 C1 C2 C C sing 1.54 N N
11 C1 O1 C O sing 1.43 N N
12 C1 H1 C H sing 1.09 N N
13 C2 O2 C O sing 1.43 N N
14 C2 C3 C C sing 1.55 N N
15 C2 H2 C H sing 1.09 N N
16 O2 HO2 O H sing 0.97 N N
17 C3 O3 C O sing 1.43 N N
18 C3 H3 C H sing 1.09 N N
19 O3 HO3 O H sing 0.97 N N
20 O1 C1' O C sing 1.36 N N
21 C1' C2' C C doub 1.39 N Y
22 C1' C6' C C sing 1.39 N Y
23 C2' C3' C C sing 1.38 N Y
24 C2' H2' C H sing 1.08 N N
25 C3' C4' C C doub 1.38 N Y
26 C3' H3' C H sing 1.08 N N
27 C4' N1' C N sing 1.48 N N
28 C4' C5' C C sing 1.38 N Y
29 N1' O3' N O sing 1.22 N N
30 N1' O2' N O doub 1.22 N N
31 C5' C6' C C doub 1.38 N Y
32 C5' H5' C H sing 1.08 N N
33 C6' H6' C H sing 1.08 N N