Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : K5T    

Bonds between two atoms of the molecule

Total Number of Bonds: 95


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O36 C40 O C doub 1.21 N N
2 N33 C35 N C sing 1.35 N N
3 C40 C39 C C sing 1.51 N N
4 C40 N41 C N sing 1.35 N N
5 C35 C42 C C sing 1.51 N N
6 C35 O34 C O doub 1.21 N N
7 C39 N38 C N sing 1.47 N N
8 C39 C37 C C sing 1.53 N N
9 C42 N41 C N sing 1.47 N N
10 C42 C43 C C sing 1.53 N N
11 C44 C43 C C sing 1.53 N N
12 C44 C45 C C sing 1.51 N N
13 N46 C45 N C sing 1.35 N N
14 N46 C47 N C sing 1.47 N N
15 C45 O32 C O doub 1.21 N N
16 O30 C31 O C doub 1.21 N N
17 C49 C48 C C sing 1.53 N N
18 C49 C23 C C sing 1.53 N N
19 C48 C47 C C sing 1.53 N N
20 C23 C01 C C sing 1.53 N N
21 C47 C31 C C sing 1.51 N N
22 C31 N29 C N sing 1.35 N N
23 C01 N02 C N sing 1.46 N N
24 N29 C28 N C sing 1.46 N N
25 O26 C27 O C doub 1.21 N N
26 C28 C27 C C sing 1.51 N N
27 C28 C24 C C sing 1.53 N N
28 C27 O25 C O sing 1.34 N N
29 N02 C03 N C sing 1.35 N N
30 C03 O22 C O doub 1.21 N N
31 C03 C04 C C sing 1.51 N N
32 C04 N05 C N sing 1.47 N N
33 N05 C06 N C sing 1.35 N N
34 O07 C06 O C doub 1.21 N N
35 C06 C08 C C sing 1.51 N N
36 C08 N09 C N sing 1.47 N N
37 O21 C10 O C doub 1.21 N N
38 O20 C13 O C doub 1.21 N N
39 N09 C10 N C sing 1.35 N N
40 C10 C11 C C sing 1.51 N N
41 O19 C16 O C doub 1.21 N N
42 C13 C14 C C sing 1.51 N N
43 C13 N12 C N sing 1.35 N N
44 C14 N15 C N sing 1.46 N N
45 C11 N12 C N sing 1.47 N N
46 C16 N15 C N sing 1.35 N N
47 C16 C17 C C sing 1.51 N N
48 N18 C17 N C sing 1.47 N N
49 N12 H1 N H sing 0.97 N N
50 C17 H2 C H sing 1.09 N N
51 C17 H3 C H sing 1.09 N N
52 C24 H4 C H sing 1.09 N N
53 C24 H5 C H sing 1.09 N N
54 C24 H6 C H sing 1.09 N N
55 C28 H7 C H sing 1.09 N N
56 C01 H8 C H sing 1.09 N N
57 C01 H9 C H sing 1.09 N N
58 N02 H10 N H sing 0.97 N N
59 C04 H11 C H sing 1.09 N N
60 C04 H12 C H sing 1.09 N N
61 N05 H13 N H sing 0.97 N N
62 C08 H14 C H sing 1.09 N N
63 C08 H15 C H sing 1.09 N N
64 N09 H16 N H sing 0.97 N N
65 C11 H17 C H sing 1.09 N N
66 C11 H18 C H sing 1.09 N N
67 C14 H19 C H sing 1.09 N N
68 C14 H20 C H sing 1.09 N N
69 N15 H21 N H sing 0.97 N N
70 N18 H22 N H sing 1.01 N N
71 N18 H24 N H sing 1.01 N N
72 C23 H25 C H sing 1.09 N N
73 C23 H26 C H sing 1.09 N N
74 O25 H27 O H sing 0.97 N N
75 N29 H28 N H sing 0.97 N N
76 N33 H29 N H sing 0.97 N N
77 N33 H30 N H sing 0.97 N N
78 C37 H31 C H sing 1.09 N N
79 C37 H32 C H sing 1.09 N N
80 C37 H33 C H sing 1.09 N N
81 N38 H34 N H sing 1.01 N N
82 N38 H35 N H sing 1.01 N N
83 C39 H37 C H sing 1.09 N N
84 N41 H38 N H sing 0.97 N N
85 C42 H39 C H sing 1.09 N N
86 C43 H40 C H sing 1.09 N N
87 C43 H41 C H sing 1.09 N N
88 C44 H42 C H sing 1.09 N N
89 C44 H43 C H sing 1.09 N N
90 N46 H44 N H sing 0.97 N N
91 C47 H45 C H sing 1.09 N N
92 C48 H46 C H sing 1.09 N N
93 C48 H47 C H sing 1.09 N N
94 C49 H48 C H sing 1.09 N N
95 C49 H49 C H sing 1.09 N N