Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : K5T

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 96


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C10 C C1 N N N 0 -8.645 0.116 -0.16
2 N12 N N1 N N N 0 -11.049 -0.219 -0.179
3 C13 C C2 N N N 0 -12.329 0.037 0.155
4 C17 C C3 N N N 0 -17.192 -0.458 0.262
5 C24 C C4 N N N 0 7.764 5.688 1.839
6 C28 C C5 R N N 0 8.089 5.17 0.437
7 C01 C C6 N N N 0 1.006 1.318 -0.198
8 N02 N N2 N N N 0 -0.281 1.796 0.313
9 C03 C C7 N N N 0 -1.423 1.182 -0.056
10 C04 C C8 N N N 0 -2.747 1.673 0.47
11 N05 N N3 N N N 0 -3.826 0.846 -0.076
12 C06 C C9 N N N 0 -5.106 1.103 0.259
13 O07 O O1 N N N 0 -5.365 2.018 1.012
14 C08 C C10 N N N 0 -6.216 0.252 -0.302
15 N09 N N4 N N N 0 -7.504 0.73 0.21
16 C11 C C11 N N N 0 -9.969 0.608 0.366
17 C14 C C12 N N N 0 -13.439 -0.813 -0.405
18 N15 N N5 N N N 0 -14.726 -0.336 0.106
19 C16 C C13 N N N 0 -15.868 -0.949 -0.264
20 N18 N N6 N N N 0 -18.274 -1.287 -0.285
21 O19 O O2 N N N 0 -15.83 -1.897 -1.02
22 O20 O O3 N N N 0 -12.587 0.952 0.908
23 O21 O O4 N N N 0 -8.608 -0.828 -0.92
24 O22 O O5 N N N 0 -1.385 0.234 -0.812
25 C23 C C14 N N N 0 2.133 2.181 0.372
26 O25 O O6 N N N 0 9.118 7.29 -0.301
27 O26 O O7 N N N 0 7.464 6.405 -1.47
28 C27 C C15 N N N 0 8.2 6.334 -0.515
29 N29 N N7 N N N 0 7.022 4.273 -0.012
30 O30 O O8 N N N 0 7.953 2.542 1.018
31 C31 C C16 N N N 0 7.047 2.97 0.335
32 O32 O O9 N N N 0 7.533 0.233 -1.337
33 N33 N N8 N N N 0 10.743 -3.812 -1.22
34 O34 O O10 N N N 0 9.232 -5.373 -1.669
35 C35 C C17 N N N 0 9.513 -4.347 -1.087
36 O36 O O11 N N N 0 7.966 -5.782 1.378
37 C37 C C18 N N N 0 4.721 -5.527 1.366
38 N38 N N9 N N N 0 6.028 -7.591 1.198
39 C39 C C19 S N N 0 5.8 -6.277 0.582
40 C40 C C20 N N N 0 7.081 -5.483 0.604
41 N41 N N10 N N N 0 7.242 -4.442 -0.236
42 C42 C C21 R N N 0 8.488 -3.67 -0.215
43 C43 C C22 N N N 0 8.222 -2.259 -0.742
44 C44 C C23 N N N 0 7.276 -1.528 0.213
45 C45 C C24 N N N 0 7.014 -0.137 -0.305
46 N46 N N11 N N N 0 6.203 0.695 0.377
47 C47 C C25 S N N 0 5.949 2.047 -0.127
48 C48 C C26 N N N 0 4.605 2.546 0.407
49 C49 C C27 N N N 0 3.477 1.682 -0.162
50 H1 H H1 N N N 0 -10.842 -0.951 -0.781
51 H2 H H2 N N N 0 -17.198 -0.524 1.35
52 H3 H H3 N N N 0 -17.34 0.579 -0.04
53 H4 H H4 N N N 0 8.558 6.356 2.173
54 H5 H H5 N N N 0 6.819 6.231 1.816
55 H6 H H6 N N N 0 7.684 4.847 2.528
56 H7 H H7 N N N 0 9.035 4.628 0.46
57 H8 H H8 N N N 0 1.155 0.281 0.104
58 H9 H H9 N N N 0 1.012 1.384 -1.286
59 H10 H H10 N N N 0 -0.312 2.553 0.918
60 H11 H H11 N N N 0 -2.753 1.607 1.558
61 H12 H H12 N N N 0 -2.895 2.71 0.168
62 H13 H H13 N N N 0 -3.619 0.115 -0.678
63 H14 H H14 N N N 0 -6.211 0.318 -1.39
64 H15 H H15 N N N 0 -6.068 -0.785 0.0
65 H16 H H16 N N N 0 -7.534 1.488 0.814
66 H17 H H17 N N N 0 -9.975 0.541 1.454
67 H18 H H18 N N N 0 -10.118 1.644 0.064
68 H19 H H19 N N N 0 -13.433 -0.747 -1.493
69 H20 H H20 N N N 0 -13.29 -1.85 -0.104
70 H21 H H21 N N N 0 -14.757 0.422 0.711
71 H22 H H22 N N N 0 -19.173 -0.978 0.054
72 H24 H H24 N N N 0 -18.25 -1.294 -1.293
73 H25 H H25 N N N 0 1.985 3.218 0.07
74 H26 H H26 N N N 0 2.127 2.115 1.46
75 H27 H H27 N N N 0 9.151 8.016 -0.939
76 H28 H H28 N N N 0 6.298 4.616 -0.558
77 H29 H H29 N N N 0 10.968 -2.992 -0.755
78 H30 H H30 N N N 0 11.403 -4.248 -1.782
79 H31 H H31 N N N 0 5.048 -5.393 2.397
80 H32 H H32 N N N 0 4.552 -4.552 0.909
81 H33 H H33 N N N 0 3.795 -6.101 1.35
82 H34 H H34 N N N 0 6.689 -8.132 0.661
83 H35 H H35 N N N 0 6.332 -7.494 2.155
84 H37 H H37 N N N 0 5.473 -6.411 -0.449
85 H38 H H38 N N N 0 6.535 -4.203 -0.855
86 H39 H H39 N N N 0 8.862 -3.612 0.807
87 H40 H H40 N N N 0 9.163 -1.713 -0.809
88 H41 H H41 N N N 0 7.765 -2.319 -1.729
89 H42 H H42 N N N 0 6.335 -2.073 0.281
90 H43 H H43 N N N 0 7.733 -1.467 1.201
91 H44 H H44 N N N 0 5.789 0.4 1.203
92 H45 H H45 N N N 0 5.923 2.029 -1.217
93 H46 H H46 N N N 0 4.599 2.48 1.495
94 H47 H H47 N N N 0 4.456 3.583 0.105
95 H48 H H48 N N N 0 3.626 0.646 0.139
96 H49 H H49 N N N 0 3.483 1.749 -1.25