Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : JCM    

Bonds between two atoms of the molecule

Total Number of Bonds: 79


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C23 C22 C C sing 1.51 N N
2 C21 C22 C C doub 1.38 N Y
3 C21 C20 C C sing 1.38 N Y
4 C22 C4 C C sing 1.39 N Y
5 N6 C29 N C sing 1.39 N N
6 C20 C6 C C doub 1.39 N Y
7 C29 N7 C N doub 1.33 N Y
8 C29 C28 C C sing 1.4 N Y
9 N7 C26 N C sing 1.33 N Y
10 C28 C27 C C doub 1.38 N Y
11 C4 N1 C N sing 1.4 N N
12 C4 C5 C C doub 1.39 N Y
13 C26 C25 C C sing 1.48 N N
14 C26 N5 C N doub 1.33 N Y
15 C27 N5 C N sing 1.32 N Y
16 C25 N4 C N sing 1.33 N Y
17 C25 C30 C C doub 1.35 N Y
18 N4 C24 N C doub 1.3 N Y
19 N1 C24 N C sing 1.39 N N
20 N1 C3 N C sing 1.47 N N
21 C30 S1 C S sing 1.76 N Y
22 C24 S1 C S sing 1.76 N Y
23 C3 C2 C C sing 1.53 N N
24 C6 C5 C C sing 1.39 N Y
25 C6 C7 C C sing 1.48 N N
26 C1 C2 C C sing 1.53 N N
27 C7 C19 C C doub 1.39 N Y
28 C7 C8 C C sing 1.39 N Y
29 C19 C18 C C sing 1.38 N Y
30 C18 C10 C C doub 1.38 N Y
31 C8 C9 C C doub 1.38 N Y
32 C9 C10 C C sing 1.38 N Y
33 C10 C11 C C sing 1.51 N N
34 C12 C11 C C sing 1.53 N N
35 C12 N2 C N sing 1.47 N N
36 C17 N2 C N sing 1.47 N N
37 C17 C16 C C sing 1.53 N N
38 N2 C13 N C sing 1.47 N N
39 C16 N3 C N sing 1.47 N N
40 C13 C14 C C sing 1.53 N N
41 N3 C14 N C sing 1.47 N N
42 N3 C15 N C sing 1.47 N N
43 C5 H2 C H sing 1.08 N N
44 C8 H3 C H sing 1.08 N N
45 C13 H4 C H sing 1.09 N N
46 C13 H5 C H sing 1.09 N N
47 C15 H6 C H sing 1.09 N N
48 C15 H7 C H sing 1.09 N N
49 C15 H8 C H sing 1.09 N N
50 C17 H9 C H sing 1.09 N N
51 C17 H10 C H sing 1.09 N N
52 C20 H11 C H sing 1.08 N N
53 C21 H12 C H sing 1.08 N N
54 C28 H13 C H sing 1.08 N N
55 C1 H14 C H sing 1.09 N N
56 C1 H15 C H sing 1.09 N N
57 C1 H16 C H sing 1.09 N N
58 C2 H17 C H sing 1.09 N N
59 C2 H18 C H sing 1.09 N N
60 C3 H19 C H sing 1.09 N N
61 C3 H20 C H sing 1.09 N N
62 C9 H21 C H sing 1.08 N N
63 C11 H22 C H sing 1.09 N N
64 C11 H23 C H sing 1.09 N N
65 C12 H24 C H sing 1.09 N N
66 C12 H25 C H sing 1.09 N N
67 C14 H27 C H sing 1.09 N N
68 C14 H28 C H sing 1.09 N N
69 C16 H29 C H sing 1.09 N N
70 C16 H30 C H sing 1.09 N N
71 C18 H31 C H sing 1.08 N N
72 C19 H32 C H sing 1.08 N N
73 C23 H33 C H sing 1.09 N N
74 C23 H34 C H sing 1.09 N N
75 C23 H35 C H sing 1.09 N N
76 C27 H36 C H sing 1.08 N N
77 N6 H37 N H sing 0.97 N N
78 N6 H38 N H sing 0.97 N N
79 C30 H39 C H sing 1.08 N N