Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : H25    

Bonds between two atoms of the molecule

Total Number of Bonds: 56


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 F3 C17 F C sing 1.33 N N
2 C17 C11 C C sing 1.39 N Y
3 C17 C16 C C doub 1.37 N Y
4 C11 C9 C C doub 1.4 N Y
5 C9 N1 C N sing 1.4 N N
6 C9 C26 C C sing 1.4 N Y
7 N1 C21 N C sing 1.35 N N
8 N1 C8 N C sing 1.35 N N
9 C21 C29 C C doub 1.38 N N
10 C29 C30 C C sing 1.39 N N
11 C30 C23 C C doub 1.39 N N
12 C23 C8 C C sing 1.39 N N
13 C8 O25 C O doub 1.27 N N
14 C26 C28 C C doub 1.4 N Y
15 C28 C16 C C sing 1.4 N Y
16 C16 N15 C N sing 1.41 N N
17 N15 C14 N C sing 1.37 N N
18 C14 O27 C O doub 1.24 N N
19 C14 C22 C C sing 1.51 N N
20 C22 N4 C N sing 1.46 N N
21 N4 C20 N C sing 1.46 N N
22 N4 C31 N C sing 1.48 N N
23 C20 C6 C C sing 1.51 N N
24 C34 C31 C C sing 1.53 N N
25 C34 O33 C O sing 1.44 N N
26 C34 C6 C C sing 1.53 N N
27 N7 C5 N C sing 1.33 N N
28 N7 C6 N C sing 1.47 N N
29 C5 O24 C O doub 1.24 N N
30 C5 C2 C C sing 1.5 N N
31 C2 C12 C C doub 1.41 N Y
32 C2 S3 C S sing 1.73 N Y
33 C12 C19 C C sing 1.4 N Y
34 C19 C10 C C doub 1.37 N Y
35 S3 C10 S C sing 1.72 N Y
36 C10 CL1 C CL sing 1.8 N N
37 C11 H11 C H sing 1.08 N N
38 C26 H26 C H sing 1.08 N N
39 C21 H21 C H sing 1.08 N N
40 C29 H29 C H sing 1.08 N N
41 C30 H30 C H sing 1.08 N N
42 C23 H23 C H sing 1.08 N N
43 C28 H28 C H sing 1.08 N N
44 N15 H15 N H sing 1.0 N N
45 C22 H221 C H sing 1.1 N N
46 C22 H222 C H sing 1.1 N N
47 C20 H201 C H sing 1.1 N N
48 C20 H202 C H sing 1.1 N N
49 C31 H311 C H sing 1.1 N N
50 C31 H312 C H sing 1.1 N N
51 C6 H6 C H sing 1.1 N N
52 C34 H34 C H sing 1.1 N N
53 O33 H33 O H sing 0.95 N N
54 N7 H7 N H sing 1.0 N N
55 C12 H12 C H sing 1.08 N N
56 C19 H19 C H sing 1.08 N N