Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : DOJ    

Bonds between two atoms of the molecule

Total Number of Bonds: 59


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 CAM CAN C C doub 1.38 N Y
2 CAM CAL C C sing 1.38 N Y
3 CAN CAI C C sing 1.38 N Y
4 CAL CAK C C doub 1.38 N Y
5 CAI CAH C C sing 1.51 N N
6 CAI CAJ C C doub 1.38 N Y
7 CAH NAG C N sing 1.47 N N
8 CAK CAJ C C sing 1.38 N Y
9 NAG CAF N C sing 1.47 N N
10 NAG CAO N C sing 1.47 N N
11 CAF CAE C C sing 1.53 N N
12 CAB OAC C O sing 1.43 N N
13 CAB OAD C O sing 1.43 N N
14 CAB CAA C C sing 1.53 N N
15 CAO CAP C C sing 1.53 N N
16 CAE OAD C O sing 1.43 N N
17 CAE CAQ C C sing 1.53 N N
18 CAP CAQ C C sing 1.53 N N
19 CAQ NAR C N sing 1.47 N N
20 NAR CAS N C sing 1.35 N N
21 CAS OAT C O doub 1.22 N N
22 CAS NAU C N sing 1.35 N N
23 NAU CAV N C sing 1.4 N N
24 CAV CBA C C doub 1.39 N Y
25 CAV CAW C C sing 1.39 N Y
26 CBA CAZ C C sing 1.38 N Y
27 CAW CAX C C doub 1.38 N Y
28 CAZ CBB C C sing 1.51 N N
29 CAZ CAY C C doub 1.38 N Y
30 CAX CAY C C sing 1.38 N Y
31 FBE CBB F C sing 1.4 N N
32 FBC CBB F C sing 1.4 N N
33 CBB FBD C F sing 1.4 N N
34 CBA HBA1 C H sing 1.08 N N
35 CAY HAY1 C H sing 1.08 N N
36 CAX HAX1 C H sing 1.08 N N
37 CAW HAW1 C H sing 1.08 N N
38 NAU HAU1 N H sing 0.97 N N
39 NAR HAR1 N H sing 0.97 N N
40 CAQ HAQ1 C H sing 1.09 N N
41 CAE HAE1 C H sing 1.09 N N
42 CAF HAF1 C H sing 1.09 N N
43 CAF HAF2 C H sing 1.09 N N
44 CAB HAB1 C H sing 1.09 N N
45 OAC HAC1 O H sing 0.97 N N
46 CAA HAA3 C H sing 1.09 N N
47 CAA HAA1 C H sing 1.09 N N
48 CAA HAA2 C H sing 1.09 N N
49 CAP HAP2 C H sing 1.09 N N
50 CAP HAP1 C H sing 1.09 N N
51 CAO HAO1 C H sing 1.09 N N
52 CAO HAO2 C H sing 1.09 N N
53 CAH HAH1 C H sing 1.09 N N
54 CAH HAH2 C H sing 1.09 N N
55 CAJ HAJ1 C H sing 1.08 N N
56 CAK HAK1 C H sing 1.08 N N
57 CAL HAL1 C H sing 1.08 N N
58 CAM HAM1 C H sing 1.08 N N
59 CAN HAN1 C H sing 1.08 N N