Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : CH6    

Bonds between two atoms of the molecule

Total Number of Bonds: 44


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 CE SD C S sing 1.81 N N
2 SD CG1 S C sing 1.81 N N
3 CG1 CB1 C C sing 1.53 N N
4 OH CZ O C sing 1.36 N N
5 CB1 CA1 C C sing 1.53 N N
6 OXT C3 O C sing 1.34 N N
7 CE1 CZ C C doub 1.39 N Y
8 CE1 CD1 C C sing 1.37 N Y
9 CZ CE2 C C sing 1.39 N Y
10 CD1 CG2 C C doub 1.4 N Y
11 CA1 C1 C C sing 1.51 N N
12 CA1 N1 C N sing 1.47 N N
13 CE2 CD2 C C doub 1.37 N Y
14 N2 C1 N C doub 1.3 N N
15 N2 CA2 N C sing 1.37 N N
16 C1 N3 C N sing 1.37 N N
17 CG2 CD2 C C sing 1.4 N Y
18 CG2 CB2 C C sing 1.46 N N
19 C3 O3 C O doub 1.21 N N
20 C3 CA3 C C sing 1.51 N N
21 CA2 CB2 C C doub 1.38 N N
22 CA2 C2 C C sing 1.47 N N
23 N3 C2 N C sing 1.35 N N
24 N3 CA3 N C sing 1.46 N N
25 C2 O2 C O doub 1.22 N N
26 N1 H N H sing 1.01 N N
27 N1 H2 N H sing 1.01 N N
28 CE HE1A C H sing 1.09 N N
29 CE HE2A C H sing 1.09 N N
30 CE HE3 C H sing 1.09 N N
31 CG1 HG11 C H sing 1.09 N N
32 CG1 HG12 C H sing 1.09 N N
33 CB1 HB11 C H sing 1.09 N N
34 CB1 HB12 C H sing 1.09 Z N
35 CA1 HA1 C H sing 1.09 N N
36 OH HOH O H sing 0.97 N N
37 CD2 HD2 C H sing 1.08 N N
38 CE2 HE2 C H sing 1.08 N N
39 CE1 HE1 C H sing 1.08 N N
40 CD1 HD1 C H sing 1.08 N N
41 CB2 HB2 C H sing 1.08 N N
42 CA3 HA31 C H sing 1.09 N N
43 CA3 HA32 C H sing 1.09 N N
44 OXT HXT O H sing 0.97 N N