PDBeChem : Chemical Bonds

Molecule : BGO

Bonds between two atoms of the molecule

Record	First Atom	Second Atom	First Element	Second Element	Bond Order Type	Bond Length	Bond Stereochemistry	Is Aromatic
1	C'	C1'	C	C	sing	1.47	N	N
2	C'	O1'	C	O	doub	1.21	N	N
3	C'	O3'	C	O	sing	1.35	N	N
4	N1	C2	N	C	sing	1.36	N	N
5	N1	C6	N	C	sing	1.35	N	N
6	C2	N2	C	N	sing	1.37	N	N
7	C2	N3	C	N	doub	1.31	N	N
8	N3	C4	N	C	sing	1.34	N	N
9	C4	C5	C	C	doub	1.4	N	Y
10	C4	N9	C	N	sing	1.37	N	Y
11	C5	C6	C	C	sing	1.41	N	N
12	C5	N7	C	N	sing	1.36	N	Y
13	C6	O6	C	O	doub	1.22	N	N
14	N7	C8	N	C	doub	1.3	N	Y
15	C8	N9	C	N	sing	1.36	N	Y
16	N9	C1B	N	C	sing	1.46	N	N
17	PA	O1A	P	O	doub	1.48	N	N
18	PA	O2A	P	O	sing	1.61	N	N
19	PA	O3A	P	O	sing	1.61	N	N
20	PA	O5'	P	O	sing	1.61	N	N
21	PB	O1B	P	O	sing	1.61	N	N
22	PB	O2B	P	O	doub	1.48	N	N
23	PB	O3A	P	O	sing	1.61	N	N
24	PB	O3B	P	O	sing	1.61	N	N
25	C1'	C2'	C	C	doub	1.4	N	Y
26	C1'	C6'	C	C	sing	1.4	N	Y
27	C1B	C2B	C	C	sing	1.55	N	N
28	C1B	O4'	C	O	sing	1.44	N	N
29	C2'	N2'	C	N	sing	1.39	N	N
30	C2'	C3'	C	C	sing	1.39	N	Y
31	N2'	CM'	N	C	sing	1.46	N	N
32	O2'	C2B	O	C	sing	1.43	N	N
33	C2B	C3B	C	C	sing	1.55	N	N
34	C3'	C4'	C	C	doub	1.38	N	Y
35	O3'	C3B	O	C	sing	1.45	N	N
36	C3B	C4B	C	C	sing	1.54	N	N
37	C4'	C5'	C	C	sing	1.39	N	Y
38	O4'	C4B	O	C	sing	1.44	N	N
39	C4B	C5B	C	C	sing	1.53	N	N
40	C5'	C6'	C	C	doub	1.38	N	Y
41	O5'	C5B	O	C	sing	1.43	N	N
42	N1	HN1	N	H	sing	0.97	N	N
43	N2	HN2	N	H	sing	0.97	N	N
44	N2	HN2A	N	H	sing	0.97	N	N
45	C8	H8	C	H	sing	1.08	N	N
46	C1B	H1B	C	H	sing	1.09	N	N
47	O1B	HO1B	O	H	sing	0.97	N	N
48	N2'	HN2'	N	H	sing	0.97	N	N
49	O2'	HO2'	O	H	sing	0.97	N	N
50	O2A	HO2A	O	H	sing	0.97	N	N
51	C2B	H2B	C	H	sing	1.09	N	N
52	C3'	H3'	C	H	sing	1.08	N	N
53	C3B	H3B	C	H	sing	1.09	N	N
54	O3B	HO3B	O	H	sing	0.97	N	N
55	C4'	H4'	C	H	sing	1.08	N	N
56	C4B	H4B	C	H	sing	1.09	N	N
57	C5'	H5'	C	H	sing	1.08	N	N
58	C5B	H5B	C	H	sing	1.09	N	N
59	C5B	H5BA	C	H	sing	1.09	N	N
60	C6'	H6'	C	H	sing	1.08	N	N
61	CM'	HM'	C	H	sing	1.09	N	N
62	CM'	HM'A	C	H	sing	1.09	N	N
63	CM'	HM'B	C	H	sing	1.09	N	N

Protein Data Bank
in Europe