Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : AYX    

Bonds between two atoms of the molecule

Total Number of Bonds: 36


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C1 S1 C S sing 1.76 N N
2 N1 HN1 N H sing 0.97 N N
3 N1 S1 N S sing 1.66 N N
4 N1 HN1A N H sing 0.97 N N
5 O1 S1 O S doub 1.42 N N
6 S1 O2 S O doub 1.42 N N
7 C2 C1 C C doub 1.38 N Y
8 C2 H2 C H sing 1.08 N N
9 C3 C2 C C sing 1.38 N Y
10 C4 C3 C C doub 1.39 N Y
11 C4 C5 C C sing 1.39 N Y
12 C5 C6 C C doub 1.38 N Y
13 C6 C1 C C sing 1.38 N Y
14 C6 H6 C H sing 1.08 N N
15 N7 C4 N C sing 1.4 N N
16 C8 N7 C N sing 1.35 N N
17 O8 C8 O C doub 1.22 N N
18 N9 C8 N C sing 1.35 N N
19 N9 HN9 N H sing 0.97 N N
20 C10 N9 C N sing 1.4 N N
21 C11 C10 C C doub 1.39 N Y
22 C11 H111 C H sing 1.08 N N
23 C12 C11 C C sing 1.38 N Y
24 C13 C12 C C doub 1.38 N Y
25 C13 C14 C C sing 1.38 N Y
26 C14 C15 C C doub 1.38 N Y
27 C15 C10 C C sing 1.39 N Y
28 C15 H115 C H sing 1.08 N N
29 N16 C12 N C sing 1.48 N N
30 N16 O17 N O sing 1.22 N N
31 O16 N16 O N doub 1.22 N N
32 H113 C13 H C sing 1.08 N N
33 H114 C14 H C sing 1.08 N N
34 H3 C3 H C sing 1.08 N N
35 H5 C5 H C sing 1.08 N N
36 HN7 N7 H N sing 0.97 N N