data_AYX
#
_chem_comp.id AYX
_chem_comp.name 4-{[(3-nitrophenyl)carbamoyl]amino}benzenesulfonamide
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C13 H12 N4 O5 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2010-05-26
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 336.323
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code AYX
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 3N2P
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
AYX C1 C1 C 0 1 Y N N N N N -5.461 2.378 15.889 -3.755 0.014 -0.044 C1 AYX 1
AYX N1 N1 N 0 1 N N N N N N -5.327 -0.328 16.125 -6.252 0.175 1.102 N1 AYX 2
AYX O1 O1 O 0 1 N N N N N N -7.387 0.976 16.793 -5.910 -0.845 -1.119 O1 AYX 3
AYX S1 S1 S 0 1 N N N N N N -5.941 0.964 16.839 -5.301 -0.804 0.164 S1 AYX 4
AYX C2 C2 C 0 1 Y N N N N N -4.163 2.490 15.409 -2.732 -0.203 0.860 C2 AYX 5
AYX O2 O2 O 0 1 N N N N N N -5.359 1.096 18.177 -5.038 -1.967 0.937 O2 AYX 6
AYX C3 C3 C 0 1 Y N N N N N -3.812 3.598 14.645 -1.518 0.437 0.698 C3 AYX 7
AYX C4 C4 C 0 1 Y N N N N N -4.772 4.567 14.406 -1.327 1.299 -0.373 C4 AYX 8
AYX C5 C5 C 0 1 Y N N N N N -6.065 4.468 14.877 -2.357 1.515 -1.279 C5 AYX 9
AYX C6 C6 C 0 1 Y N N N N N -6.413 3.353 15.639 -3.566 0.869 -1.115 C6 AYX 10
AYX N7 N7 N 0 1 N N N N N N -4.358 5.691 13.585 -0.099 1.949 -0.539 N7 AYX 11
AYX C8 C8 C 0 1 N N N N N N -5.239 6.338 12.644 1.043 1.337 -0.168 C8 AYX 12
AYX O8 O8 O 0 1 N N N N N N -6.451 6.182 12.568 1.017 0.186 0.223 O8 AYX 13
AYX N9 N9 N 0 1 N N N N N N -4.613 7.415 11.943 2.215 2.001 -0.230 N9 AYX 14
AYX C10 C10 C 0 1 Y N N N N N -5.186 8.313 10.998 3.412 1.335 0.051 C10 AYX 15
AYX C11 C11 C 0 1 Y N N N N N -6.374 7.984 10.353 3.553 -0.008 -0.272 C11 AYX 16
AYX C12 C12 C 0 1 Y N N N N N -6.890 8.877 9.408 4.737 -0.664 0.006 C12 AYX 17
AYX C13 C13 C 0 1 Y N N N N N -6.252 10.077 9.156 5.781 0.016 0.605 C13 AYX 18
AYX C14 C14 C 0 1 Y N N N N N -5.054 10.382 9.801 5.644 1.354 0.929 C14 AYX 19
AYX C15 C15 C 0 1 Y N N N N N -4.521 9.502 10.746 4.465 2.016 0.648 C15 AYX 20
AYX N16 N16 N 1 1 N N N N N N -8.112 8.582 8.735 4.889 -2.095 -0.338 N16 AYX 21
AYX O16 O16 O 0 1 N N N N N N -8.619 9.465 7.920 5.932 -2.673 -0.094 O16 AYX 22
AYX O17 O17 O -1 1 N N N N N N -8.666 7.429 8.875 3.969 -2.695 -0.867 O17 AYX 23
AYX H111 H111 H 0 0 N N N N N N -6.886 7.060 10.577 2.738 -0.540 -0.740 H111 AYX 24
AYX HN1 HN1 H 0 1 N N N N N N -5.582 -1.147 16.640 -7.216 0.164 0.994 HN1 AYX 25
AYX H113 H113 H 0 0 N N N N N N -6.682 10.780 8.458 6.706 -0.498 0.822 H113 AYX 26
AYX H114 H114 H 0 0 N N N N N N -4.537 11.301 9.569 6.461 1.883 1.398 H114 AYX 27
AYX H115 H115 H 0 0 N N N N N N -3.608 9.744 11.270 4.358 3.061 0.901 H115 AYX 28
AYX H2 H2 H 0 1 N N N N N N -3.433 1.724 15.627 -2.881 -0.874 1.693 H2 AYX 29
AYX H3 H3 H 0 1 N N N N N N -2.813 3.700 14.247 -0.719 0.267 1.405 H3 AYX 30
AYX H5 H5 H 0 1 N N N N N N -6.792 5.237 14.660 -2.211 2.186 -2.113 H5 AYX 31
AYX H6 H6 H 0 1 N N N N N N -7.414 3.251 16.030 -4.367 1.036 -1.819 H6 AYX 32
AYX HN7 HN7 H 0 1 N N N N N N -3.422 6.031 13.676 -0.069 2.840 -0.921 HN7 AYX 33
AYX HN9 HN9 H 0 1 N N N N N N -3.643 7.557 12.143 2.227 2.941 -0.469 HN9 AYX 34
AYX HN1A HN1A H 0 0 N N N N N N -5.685 -0.396 15.194 -5.845 0.761 1.760 HN1A AYX 35
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
AYX C1 S1 SING N N 1
AYX N1 HN1 SING N N 2
AYX N1 S1 SING N N 3
AYX N1 HN1A SING N N 4
AYX O1 S1 DOUB N N 5
AYX S1 O2 DOUB N N 6
AYX C2 C1 DOUB Y N 7
AYX C2 H2 SING N N 8
AYX C3 C2 SING Y N 9
AYX C4 C3 DOUB Y N 10
AYX C4 C5 SING Y N 11
AYX C5 C6 DOUB Y N 12
AYX C6 C1 SING Y N 13
AYX C6 H6 SING N N 14
AYX N7 C4 SING N N 15
AYX C8 N7 SING N N 16
AYX O8 C8 DOUB N N 17
AYX N9 C8 SING N N 18
AYX N9 HN9 SING N N 19
AYX C10 N9 SING N N 20
AYX C11 C10 DOUB Y N 21
AYX C11 H111 SING N N 22
AYX C12 C11 SING Y N 23
AYX C13 C12 DOUB Y N 24
AYX C13 C14 SING Y N 25
AYX C14 C15 DOUB Y N 26
AYX C15 C10 SING Y N 27
AYX C15 H115 SING N N 28
AYX N16 C12 SING N N 29
AYX N16 O17 SING N N 30
AYX O16 N16 DOUB N N 31
AYX H113 C13 SING N N 32
AYX H114 C14 SING N N 33
AYX H3 C3 SING N N 34
AYX H5 C5 SING N N 35
AYX HN7 N7 SING N N 36
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
AYX SMILES ACDLabs 12.01 O=S(=O)(N)c2ccc(NC(=O)Nc1cccc([N+]([O-])=O)c1)cc2
AYX SMILES_CANONICAL CACTVS 3.370 N[S](=O)(=O)c1ccc(NC(=O)Nc2cccc(c2)[N+]([O-])=O)cc1
AYX SMILES CACTVS 3.370 N[S](=O)(=O)c1ccc(NC(=O)Nc2cccc(c2)[N+]([O-])=O)cc1
AYX SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 c1cc(cc(c1)[N+](=O)[O-])NC(=O)Nc2ccc(cc2)S(=O)(=O)N
AYX SMILES "OpenEye OEToolkits" 1.7.0 c1cc(cc(c1)[N+](=O)[O-])NC(=O)Nc2ccc(cc2)S(=O)(=O)N
AYX InChI InChI 1.03 InChI=1S/C13H12N4O5S/c14-23(21,22)12-6-4-9(5-7-12)15-13(18)16-10-2-1-3-11(8-10)17(19)20/h1-8H,(H2,14,21,22)(H2,15,16,18)
AYX InChIKey InChI 1.03 MTGVDZIMBQRGPD-UHFFFAOYSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
AYX "SYSTEMATIC NAME" ACDLabs 12.01 4-{[(3-nitrophenyl)carbamoyl]amino}benzenesulfonamide
AYX "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 1-(3-nitrophenyl)-3-(4-sulfamoylphenyl)urea
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
AYX 'Create component' 2010-05-26 RCSB
AYX 'Modify descriptor' 2011-06-04 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
AYX C1 C 10.794 3.143 1
AYX N1 N 12.294 4.643 2
AYX O1 O 9.294 4.643 3
AYX S1 S 10.794 4.643 4
AYX C2 C 9.495 2.393 5
AYX O2 O 10.794 6.143 6
AYX C3 C 9.495 0.892 7
AYX C4 C 10.794 0.142 8
AYX C5 C 12.093 0.892 9
AYX C6 C 12.093 2.393 10
AYX N7 N 10.794 -1.357 11
AYX C8 C 9.495 -2.107 12
AYX O8 O 8.196 -1.357 13
AYX N9 N 9.495 -3.607 14
AYX C10 C 8.196 -4.357 15
AYX C11 C 6.897 -3.607 16
AYX C12 C 5.598 -4.357 17
AYX C13 C 5.598 -5.857 18
AYX C14 C 6.897 -6.607 19
AYX C15 C 8.196 -5.857 20
AYX N16 N 4.299 -3.607 21
AYX O16 O 4.299 -2.107 22
AYX O17 O 3.000 -4.357 23
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
AYX C1 S1 SINGLE NONE 1
AYX N1 S1 SINGLE NONE 2
AYX O1 S1 DOUBLE NONE 3
AYX S1 O2 DOUBLE NONE 4
AYX C2 C1 DOUBLE NONE 5
AYX C3 C2 SINGLE NONE 6
AYX C4 C3 DOUBLE NONE 7
AYX C4 C5 SINGLE NONE 8
AYX C5 C6 DOUBLE NONE 9
AYX C6 C1 SINGLE NONE 10
AYX N7 C4 SINGLE NONE 11
AYX C8 N7 SINGLE NONE 12
AYX O8 C8 DOUBLE NONE 13
AYX N9 C8 SINGLE NONE 14
AYX C10 N9 SINGLE NONE 15
AYX C11 C10 DOUBLE NONE 16
AYX C12 C11 SINGLE NONE 17
AYX C13 C12 DOUBLE NONE 18
AYX C13 C14 SINGLE NONE 19
AYX C14 C15 DOUBLE NONE 20
AYX C15 C10 SINGLE NONE 21
AYX N16 C12 SINGLE NONE 22
AYX N16 O17 SINGLE NONE 23
AYX O16 N16 DOUBLE NONE 24
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
AYX MurckoScaffold S1 scaffold O=C(Nc1ccccc1)Nc1ccccc1 InChI=1S/C13H12N2O/c16-13(14-11-7-3-1-4-8-11)15-12-9-5-2-6-10-12/h1-10H,(H2,14,15,16) GWEHVDNNLFDJLR-UHFFFAOYSA-N
AYX phenyl F1 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
AYX C1 S1 1
AYX C2 S1 1
AYX C3 S1 1
AYX C4 S1 1
AYX C5 S1 1
AYX C6 S1 1
AYX N7 S1 1
AYX C8 S1 1
AYX O8 S1 1
AYX N9 S1 1
AYX C10 S1 1
AYX C11 S1 1
AYX C12 S1 1
AYX C13 S1 1
AYX C14 S1 1
AYX C15 S1 1
AYX C1 F1 1
AYX C2 F1 1
AYX C3 F1 1
AYX C4 F1 1
AYX C5 F1 1
AYX C6 F1 1
AYX C10 F1 2
AYX C11 F1 2
AYX C12 F1 2
AYX C13 F1 2
AYX C14 F1 2
AYX C15 F1 2
#
_pdbe_chem_comp_rdkit_properties.comp_id AYX
_pdbe_chem_comp_rdkit_properties.exactmw 336.053
_pdbe_chem_comp_rdkit_properties.amw 336.329
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 9
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 4
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 5
_pdbe_chem_comp_rdkit_properties.NumHBD 3
_pdbe_chem_comp_rdkit_properties.NumHBA 5
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 23
_pdbe_chem_comp_rdkit_properties.NumAtoms 35
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 10
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 2
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0
_pdbe_chem_comp_rdkit_properties.NumRings 2
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 147.960
_pdbe_chem_comp_rdkit_properties.tpsa 144.430
_pdbe_chem_comp_rdkit_properties.CrippenClogP 0.636
_pdbe_chem_comp_rdkit_properties.CrippenMR 81.651
_pdbe_chem_comp_rdkit_properties.chi0v 11.555
_pdbe_chem_comp_rdkit_properties.chi1v 6.847
_pdbe_chem_comp_rdkit_properties.chi2v 2.763
_pdbe_chem_comp_rdkit_properties.chi3v 2.763
_pdbe_chem_comp_rdkit_properties.chi4v 1.527
_pdbe_chem_comp_rdkit_properties.chi0n 22.738
_pdbe_chem_comp_rdkit_properties.chi1n 11.196
_pdbe_chem_comp_rdkit_properties.chi2n 2.043
_pdbe_chem_comp_rdkit_properties.chi3n 2.043
_pdbe_chem_comp_rdkit_properties.chi4n 1.167
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.980
_pdbe_chem_comp_rdkit_properties.kappa1 6.642
_pdbe_chem_comp_rdkit_properties.kappa2 6.419
_pdbe_chem_comp_rdkit_properties.kappa3 4.493
_pdbe_chem_comp_rdkit_properties.Phi 1.854
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
AYX UniChem SureChEMBL SCHEMBL672979
AYX UniChem 'PubChem TPHARMA' 121275079
AYX UniChem BindingDb 50334349
AYX UniChem PubChem 50909907
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
AYX C1 4.491 0.247 0.480 ETKDGv3 1
AYX N1 6.595 -1.436 -0.456 ETKDGv3 2
AYX O1 6.998 0.397 1.401 ETKDGv3 3
AYX S1 6.216 0.140 0.143 ETKDGv3 4
AYX C2 3.620 0.466 -0.517 ETKDGv3 5
AYX O2 6.597 1.173 -0.880 ETKDGv3 6
AYX C3 2.171 0.544 -0.236 ETKDGv3 7
AYX C4 1.710 0.367 1.017 ETKDGv3 8
AYX C5 2.678 0.137 2.116 ETKDGv3 9
AYX C6 3.990 0.073 1.862 ETKDGv3 10
AYX N7 0.310 0.468 1.328 ETKDGv3 11
AYX C8 -0.747 0.038 0.456 ETKDGv3 12
AYX O8 -0.490 -0.682 -0.547 ETKDGv3 13
AYX N9 -2.107 0.365 0.780 ETKDGv3 14
AYX C10 -3.213 0.180 -0.121 ETKDGv3 15
AYX C11 -4.434 -0.087 0.373 ETKDGv3 16
AYX C12 -5.601 -0.270 -0.530 ETKDGv3 17
AYX C13 -5.422 -0.144 -1.859 ETKDGv3 18
AYX C14 -4.091 0.184 -2.407 ETKDGv3 19
AYX C15 -3.046 0.342 -1.588 ETKDGv3 20
AYX N16 -6.895 -0.580 0.019 ETKDGv3 21
AYX O16 -7.886 -0.738 -0.724 ETKDGv3 22
AYX O17 -7.059 -0.707 1.379 ETKDGv3 23
AYX H111 -4.567 -0.186 1.444 ETKDGv3 24
AYX HN1 6.264 -2.122 0.260 ETKDGv3 25
AYX H113 -6.248 -0.269 -2.548 ETKDGv3 26
AYX H114 -3.968 0.309 -3.475 ETKDGv3 27
AYX H115 -2.088 0.618 -2.007 ETKDGv3 28
AYX H2 3.967 0.590 -1.535 ETKDGv3 29
AYX H3 1.499 0.773 -1.052 ETKDGv3 30
AYX H5 2.321 0.010 3.130 ETKDGv3 31
AYX H6 4.684 -0.107 2.674 ETKDGv3 32
AYX HN7 0.047 0.793 2.286 ETKDGv3 33
AYX HN9 -2.308 0.700 1.749 ETKDGv3 34
AYX HN1A 6.013 -1.587 -1.310 ETKDGv3 35
#