Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : AYX

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 35


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N Y N 0 -3.755 0.014 -0.044
2 N1 N N1 N N N 0 -6.252 0.175 1.102
3 O1 O O1 N N N 0 -5.91 -0.845 -1.119
4 S1 S S1 N N N 0 -5.301 -0.804 0.164
5 C2 C C2 N Y N 0 -2.732 -0.203 0.86
6 O2 O O2 N N N 0 -5.038 -1.967 0.937
7 C3 C C3 N Y N 0 -1.518 0.437 0.698
8 C4 C C4 N Y N 0 -1.327 1.299 -0.373
9 C5 C C5 N Y N 0 -2.357 1.515 -1.279
10 C6 C C6 N Y N 0 -3.566 0.869 -1.115
11 N7 N N7 N N N 0 -0.099 1.949 -0.539
12 C8 C C8 N N N 0 1.043 1.337 -0.168
13 O8 O O8 N N N 0 1.017 0.186 0.223
14 N9 N N9 N N N 0 2.215 2.001 -0.23
15 C10 C C10 N Y N 0 3.412 1.335 0.051
16 C11 C C11 N Y N 0 3.553 -0.008 -0.272
17 C12 C C12 N Y N 0 4.737 -0.664 0.006
18 C13 C C13 N Y N 0 5.781 0.016 0.605
19 C14 C C14 N Y N 0 5.644 1.354 0.929
20 C15 C C15 N Y N 0 4.465 2.016 0.648
21 N16 N N16 N N N 1 4.889 -2.095 -0.338
22 O16 O O16 N N N 0 5.932 -2.673 -0.094
23 O17 O O17 N N N -1 3.969 -2.695 -0.867
24 H111 H H111 N N N 0 2.738 -0.54 -0.74
25 HN1 H HN1 N N N 0 -7.216 0.164 0.994
26 H113 H H113 N N N 0 6.706 -0.498 0.822
27 H114 H H114 N N N 0 6.461 1.883 1.398
28 H115 H H115 N N N 0 4.358 3.061 0.901
29 H2 H H2 N N N 0 -2.881 -0.874 1.693
30 H3 H H3 N N N 0 -0.719 0.267 1.405
31 H5 H H5 N N N 0 -2.211 2.186 -2.113
32 H6 H H6 N N N 0 -4.367 1.036 -1.819
33 HN7 H HN7 N N N 0 -0.069 2.84 -0.921
34 HN9 H HN9 N N N 0 2.227 2.941 -0.469
35 HN1A H HN1A N N N 0 -5.845 0.761 1.76