Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 9VG    

Bonds between two atoms of the molecule

Total Number of Bonds: 61


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 OAD CBB O C doub 1.24 N N
2 OAF CAY O C sing 1.37 N N
3 CAQ CAO C C doub 1.4 N Y
4 CAQ CBD C C sing 1.41 N Y
5 CBB CBD C C sing 1.41 N N
6 CBB CBF C C sing 1.41 N N
7 CAY CBF C C doub 1.4 N Y
8 CAY CAS C C sing 1.38 N Y
9 CAO CAP C C sing 1.39 N Y
10 CBD CBE C C doub 1.41 N Y
11 CBF CBG C C sing 1.42 N Y
12 CAS CAZ C C doub 1.4 N Y
13 OAG CBH O C sing 1.42 N N
14 CAP CAR C C doub 1.4 N Y
15 CBE CAR C C sing 1.41 N Y
16 CBE CBC C C sing 1.4 N N
17 CBG CBC C C sing 1.43 N N
18 CBG CBA C C doub 1.41 N Y
19 CAZ CBA C C sing 1.44 N Y
20 CAZ CBK C C sing 1.44 N N
21 CBC OAE C O doub 1.25 N N
22 CBA NAT C N sing 1.43 N N
23 CBH CBK C C sing 1.61 N N
24 CBH CAJ C C sing 1.51 N N
25 OAV CBK O C sing 1.45 N N
26 OAV CBJ O C sing 1.45 N N
27 CBK CBJ C C sing 1.55 N N
28 CAJ CAH C C trip 1.25 N N
29 NAT CBI N C sing 1.48 N N
30 CBJ CBI C C sing 1.55 N N
31 CBJ CAX C C sing 1.54 N N
32 CAH CAL C C sing 1.47 N N
33 CBI CAK C C sing 1.51 N N
34 CAB CAX C C sing 1.54 N N
35 CAX CAN C C doub 1.52 E N
36 CAK CAI C C trip 1.27 N N
37 CAL CAM C C doub 1.43 Z N
38 CAI CAM C C sing 1.5 N N
39 CAN CAW C C sing 1.51 N N
40 CAW OAC C O doub 1.23 N N
41 CAW OAU C O sing 1.36 N N
42 OAU CAA O C sing 1.42 N N
43 CAA H1 C H sing 1.1 N N
44 CAA H2 C H sing 1.1 N N
45 CAA H3 C H sing 1.1 N N
46 CAN H4 C H sing 1.08 N N
47 CAB H5 C H sing 1.1 N N
48 CAB H6 C H sing 1.1 N N
49 CAB H7 C H sing 1.1 N N
50 CAS H8 C H sing 1.08 N N
51 OAF H9 O H sing 0.95 N N
52 CAQ H10 C H sing 1.08 N N
53 CAO H11 C H sing 1.08 N N
54 CAP H12 C H sing 1.08 N N
55 CAR H13 C H sing 1.08 N N
56 NAT H14 N H sing 1.0 N N
57 CBI H15 C H sing 1.1 N N
58 CAM H16 C H sing 1.08 N N
59 CAL H18 C H sing 1.08 N N
60 CBH H20 C H sing 1.1 N N
61 OAG H21 O H sing 0.95 N N