data_9VG
#
_chem_comp.id 9VG
_chem_comp.name
"methyl (2E)-3-[(1aS,11S,11aS,14Z,18R)-3,18-dihydroxy-4,9-dioxo-4,9,10,11-tetrahydro-11aH-11,1a-hept[3]ene[1,5]diynonaphtho[2,3-h]oxireno[c]quinolin-11a-yl]but-2-enoate"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C29 H19 N O7"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2017-06-14
_chem_comp.pdbx_modified_date 2018-06-01
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 493.464
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 9VG
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 5W27
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
9VG CAA C1 C 0 1 N N N N N N -8.900 6.929 -2.165 -8.900 6.929 -2.165 CAA 9VG 1
9VG OAU O1 O 0 1 N N N N N N -9.057 6.230 -3.396 -9.057 6.230 -3.396 OAU 9VG 2
9VG CAW C2 C 0 1 N N N N N N -10.064 6.663 -4.200 -10.064 6.663 -4.200 CAW 9VG 3
9VG OAC O2 O 0 1 N N N N N N -10.621 7.763 -4.138 -10.621 7.763 -4.138 OAC 9VG 4
9VG CAN C3 C 0 1 N N N N N N -10.401 5.614 -5.235 -10.401 5.614 -5.235 CAN 9VG 5
9VG CAX C4 C 0 1 N N N N N N -11.495 5.758 -6.285 -11.495 5.758 -6.285 CAX 9VG 6
9VG CAB C5 C 0 1 N N N N N N -12.365 7.025 -6.351 -12.365 7.025 -6.351 CAB 9VG 7
9VG CBJ C6 C 0 1 N N S N N N -11.790 4.582 -7.242 -11.790 4.582 -7.242 CBJ 9VG 8
9VG OAV O3 O 0 1 N N N N N N -12.208 5.022 -8.558 -12.208 5.022 -8.558 OAV 9VG 9
9VG CBK C7 C 0 1 N N S N N N -10.985 4.238 -8.527 -10.985 4.238 -8.527 CBK 9VG 10
9VG CAZ C8 C 0 1 Y N N N N N -11.235 2.963 -9.138 -11.235 2.963 -9.138 CAZ 9VG 11
9VG CAS C9 C 0 1 Y N N N N N -10.511 2.551 -10.268 -10.511 2.551 -10.268 CAS 9VG 12
9VG CAY C10 C 0 1 Y N N N N N -10.803 1.347 -10.887 -10.803 1.347 -10.887 CAY 9VG 13
9VG OAF O4 O 0 1 N N N N N N -10.065 0.963 -11.971 -10.065 0.963 -11.971 OAF 9VG 14
9VG CBF C11 C 0 1 Y N N N N N -11.827 0.502 -10.428 -11.827 0.502 -10.428 CBF 9VG 15
9VG CBB C12 C 0 1 N N N N N N -12.089 -0.725 -11.081 -12.089 -0.725 -11.081 CBB 9VG 16
9VG OAD O5 O 0 1 N N N N N N -11.422 -1.047 -12.078 -11.422 -1.047 -12.078 OAD 9VG 17
9VG CBD C13 C 0 1 Y N N N N N -13.101 -1.578 -10.584 -13.101 -1.578 -10.584 CBD 9VG 18
9VG CAQ C14 C 0 1 Y N N N N N -13.381 -2.806 -11.214 -13.381 -2.806 -11.214 CAQ 9VG 19
9VG CAO C15 C 0 1 Y N N N N N -14.387 -3.657 -10.733 -14.387 -3.657 -10.733 CAO 9VG 20
9VG CAP C16 C 0 1 Y N N N N N -15.132 -3.285 -9.617 -15.132 -3.285 -9.617 CAP 9VG 21
9VG CAR C17 C 0 1 Y N N N N N -14.870 -2.061 -8.983 -14.870 -2.061 -8.983 CAR 9VG 22
9VG CBE C18 C 0 1 Y N N N N N -13.856 -1.202 -9.454 -13.856 -1.202 -9.454 CBE 9VG 23
9VG CBC C19 C 0 1 N N N N N N -13.621 0.023 -8.813 -13.621 0.023 -8.813 CBC 9VG 24
9VG OAE O6 O 0 1 N N N N N N -14.315 0.329 -7.818 -14.315 0.329 -7.818 OAE 9VG 25
9VG CBG C20 C 0 1 Y N N N N N -12.588 0.886 -9.292 -12.588 0.886 -9.292 CBG 9VG 26
9VG CBA C21 C 0 1 Y N N N N N -12.299 2.115 -8.673 -12.299 2.115 -8.673 CBA 9VG 27
9VG NAT N1 N 0 1 N N N N N N -13.065 2.512 -7.533 -13.065 2.512 -7.533 NAT 9VG 28
9VG CBI C22 C 0 1 N N S N N N -12.392 3.353 -6.522 -12.392 3.353 -6.522 CBI 9VG 29
9VG CAK C23 C 0 1 N N N N N N -11.135 2.713 -5.974 -11.135 2.713 -5.974 CAK 9VG 30
9VG CAI C24 C 0 1 N N N N N N -10.050 2.196 -5.549 -10.050 2.196 -5.549 CAI 9VG 31
9VG CAM C25 C 0 1 N N N N N N -8.738 1.631 -5.085 -8.738 1.631 -5.085 CAM 9VG 32
9VG CAL C26 C 0 1 N N N N N N -7.670 2.146 -5.878 -7.670 2.146 -5.878 CAL 9VG 33
9VG CAH C27 C 0 1 N N N N N N -8.234 3.102 -6.841 -8.234 3.102 -6.841 CAH 9VG 34
9VG CAJ C28 C 0 1 N N N N N N -8.780 3.884 -7.646 -8.780 3.884 -7.646 CAJ 9VG 35
9VG CBH C29 C 0 1 N N R N N N -9.491 4.835 -8.575 -9.491 4.835 -8.575 CBH 9VG 36
9VG OAG O7 O 0 1 N N N N N N -8.918 4.956 -9.871 -8.918 4.956 -9.871 OAG 9VG 37
9VG H1 H1 H 0 1 N N N N N N -8.061 6.495 -1.601 -8.061 6.495 -1.601 H1 9VG 38
9VG H2 H2 H 0 1 N N N N N N -8.694 7.990 -2.370 -8.694 7.990 -2.370 H2 9VG 39
9VG H3 H3 H 0 1 N N N N N N -9.823 6.842 -1.574 -9.823 6.842 -1.574 H3 9VG 40
9VG H4 H4 H 0 1 N N N N N N -9.827 4.699 -5.230 -9.826 4.700 -5.230 H4 9VG 41
9VG H5 H5 H 0 1 N N N N N N -12.013 7.751 -5.603 -12.013 7.751 -5.603 H5 9VG 42
9VG H6 H6 H 0 1 N N N N N N -12.292 7.468 -7.355 -12.292 7.468 -7.355 H6 9VG 43
9VG H7 H7 H 0 1 N N N N N N -13.412 6.762 -6.142 -13.412 6.762 -6.142 H7 9VG 44
9VG H8 H8 H 0 1 N N N N N N -9.721 3.177 -10.657 -9.721 3.177 -10.657 H8 9VG 45
9VG H9 H9 H 0 1 N N N N N N -10.378 0.123 -12.286 -10.378 0.123 -12.286 H9 9VG 46
9VG H10 H10 H 0 1 N N N N N N -12.811 -3.098 -12.083 -12.811 -3.098 -12.083 H10 9VG 47
9VG H11 H11 H 0 1 N N N N N N -14.583 -4.597 -11.227 -14.583 -4.597 -11.226 H11 9VG 48
9VG H12 H12 H 0 1 N N N N N N -15.908 -3.936 -9.241 -15.908 -3.935 -9.241 H12 9VG 49
9VG H13 H13 H 0 1 N N N N N N -15.454 -1.773 -8.121 -15.454 -1.773 -8.121 H13 9VG 50
9VG H14 H14 H 0 1 N N N N N N -13.858 3.021 -7.867 -13.858 3.021 -7.867 H14 9VG 51
9VG H15 H15 H 0 1 N N N N N N -13.075 3.660 -5.716 -13.075 3.660 -5.716 H15 9VG 52
9VG H16 H16 H 0 1 N N N N N N -8.620 0.935 -4.268 -8.620 0.935 -4.268 H16 9VG 53
9VG H18 H18 H 0 1 N N N N N N -6.627 1.879 -5.786 -6.627 1.880 -5.786 H18 9VG 54
9VG H20 H20 H 0 1 N N N N N N -9.523 5.825 -8.096 -9.523 5.825 -8.096 H20 9VG 55
9VG H21 H21 H 0 1 N N N N N N -8.041 5.315 -9.798 -8.041 5.315 -9.798 H21 9VG 56
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
9VG OAD CBB DOUB N N 1
9VG OAF CAY SING N N 2
9VG CAQ CAO DOUB Y N 3
9VG CAQ CBD SING Y N 4
9VG CBB CBD SING N N 5
9VG CBB CBF SING N N 6
9VG CAY CBF DOUB Y N 7
9VG CAY CAS SING Y N 8
9VG CAO CAP SING Y N 9
9VG CBD CBE DOUB Y N 10
9VG CBF CBG SING Y N 11
9VG CAS CAZ DOUB Y N 12
9VG OAG CBH SING N N 13
9VG CAP CAR DOUB Y N 14
9VG CBE CAR SING Y N 15
9VG CBE CBC SING N N 16
9VG CBG CBC SING N N 17
9VG CBG CBA DOUB Y N 18
9VG CAZ CBA SING Y N 19
9VG CAZ CBK SING N N 20
9VG CBC OAE DOUB N N 21
9VG CBA NAT SING N N 22
9VG CBH CBK SING N N 23
9VG CBH CAJ SING N N 24
9VG OAV CBK SING N N 25
9VG OAV CBJ SING N N 26
9VG CBK CBJ SING N N 27
9VG CAJ CAH TRIP N N 28
9VG NAT CBI SING N N 29
9VG CBJ CBI SING N N 30
9VG CBJ CAX SING N N 31
9VG CAH CAL SING N N 32
9VG CBI CAK SING N N 33
9VG CAB CAX SING N N 34
9VG CAX CAN DOUB N E 35
9VG CAK CAI TRIP N N 36
9VG CAL CAM DOUB N Z 37
9VG CAI CAM SING N N 38
9VG CAN CAW SING N N 39
9VG CAW OAC DOUB N N 40
9VG CAW OAU SING N N 41
9VG OAU CAA SING N N 42
9VG CAA H1 SING N N 43
9VG CAA H2 SING N N 44
9VG CAA H3 SING N N 45
9VG CAN H4 SING N N 46
9VG CAB H5 SING N N 47
9VG CAB H6 SING N N 48
9VG CAB H7 SING N N 49
9VG CAS H8 SING N N 50
9VG OAF H9 SING N N 51
9VG CAQ H10 SING N N 52
9VG CAO H11 SING N N 53
9VG CAP H12 SING N N 54
9VG CAR H13 SING N N 55
9VG NAT H14 SING N N 56
9VG CBI H15 SING N N 57
9VG CAM H16 SING N N 58
9VG CAL H18 SING N N 59
9VG CBH H20 SING N N 60
9VG OAG H21 SING N N 61
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
9VG SMILES ACDLabs 12.01 "COC(=O)[C@H]=C(C)C21C3Nc6c(C1(O2)C(C#CC=CC#C3)O)cc(c4c6C(c5c(C4=O)cccc5)=O)O"
9VG InChI InChI 1.03 InChI=1S/C29H19NO7/c1-15(13-22(33)36-2)28-20-11-5-3-4-6-12-21(32)29(28,37-28)18-14-19(31)23-24(25(18)30-20)27(35)17-10-8-7-9-16(17)26(23)34/h3-4,7-10,13-14,20-21,30-32H,1-2H3/b4-3-,15-13+/t20-,21+,28-,29-/m0/s1
9VG InChIKey InChI 1.03 VNWTWPJYWHYMNF-PUHZCEAISA-N
9VG SMILES_CANONICAL CACTVS 3.385 "COC(=O)\C=C(/C)[C@@]12O[C@@]13[C@H](O)C#C\C=C/C#C[C@@H]2Nc4c3cc(O)c5C(=O)c6ccccc6C(=O)c45"
9VG SMILES CACTVS 3.385 "COC(=O)C=C(C)[C]12O[C]13[CH](O)C#CC=CC#C[CH]2Nc4c3cc(O)c5C(=O)c6ccccc6C(=O)c45"
9VG SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "C/C(=C\C(=O)OC)/[C@]12[C@@H]3C#C/C=C\C#C[C@H]([C@@]1(O2)c4cc(c5c(c4N3)C(=O)c6ccccc6C5=O)O)O"
9VG SMILES "OpenEye OEToolkits" 2.0.6 "CC(=CC(=O)OC)C12C3C#CC=CC#CC(C1(O2)c4cc(c5c(c4N3)C(=O)c6ccccc6C5=O)O)O"
#
_pdbx_chem_comp_identifier.comp_id 9VG
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program ACDLabs
_pdbx_chem_comp_identifier.program_version 12.01
_pdbx_chem_comp_identifier.identifier
"methyl (2E)-3-[(1aS,11S,11aS,14Z,18R)-3,18-dihydroxy-4,9-dioxo-4,9,10,11-tetrahydro-11aH-11,1a-hept[3]ene[1,5]diynonaphtho[2,3-h]oxireno[c]quinolin-11a-yl]but-2-enoate"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
9VG 'Create component' 2017-06-14 RCSB
9VG 'Initial release' 2018-06-06 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
9VG CAA C 3.000 1.318 1
9VG OAU O 4.299 0.568 2
9VG CAW C 5.598 1.318 3
9VG OAC O 5.598 2.818 4
9VG CAN C 6.897 0.568 5
9VG CAX C 6.897 -0.932 6
9VG CAB C 5.933 -2.081 7
9VG CBJ C 8.196 -1.682 8
9VG OAV O 8.196 -3.182 9
9VG CBK C 9.495 -2.432 10
9VG CAZ C 10.794 -1.682 11
9VG CAS C 12.135 -2.484 12
9VG CAY C 13.494 -1.713 13
9VG OAF O 14.790 -2.468 14
9VG CBF C 13.494 -0.150 15
9VG CBB C 14.910 0.652 16
9VG OAD O 16.206 -0.102 17
9VG CBD C 14.910 2.280 18
9VG CAQ C 16.384 3.116 19
9VG CAO C 16.384 4.812 20
9VG CAP C 14.910 5.648 21
9VG CAR C 13.455 4.778 22
9VG CBE C 13.494 3.083 23
9VG CBC C 12.098 2.247 24
9VG OAE O 10.784 2.972 25
9VG CBG C 12.135 0.620 26
9VG CBA C 10.794 -0.182 27
9VG NAT N 9.495 0.568 28
9VG CBI C 8.196 -0.182 29
9VG CAK C 6.776 0.001 30
9VG CAI C 5.524 -0.695 31
9VG CAM C 4.928 -1.997 32
9VG CAL C 5.221 -3.399 33
9VG CAH C 6.289 -4.354 34
9VG CAJ C 7.715 -4.489 35
9VG CBH C 8.943 -3.753 36
9VG OAG O 10.077 -4.734 37
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
9VG OAD CBB DOUBLE NONE 1
9VG OAF CAY SINGLE NONE 2
9VG CAQ CAO DOUBLE NONE 3
9VG CAQ CBD SINGLE NONE 4
9VG CBB CBD SINGLE NONE 5
9VG CBB CBF SINGLE NONE 6
9VG CAY CBF DOUBLE NONE 7
9VG CAY CAS SINGLE NONE 8
9VG CAO CAP SINGLE NONE 9
9VG CBD CBE DOUBLE NONE 10
9VG CBF CBG SINGLE NONE 11
9VG CAS CAZ DOUBLE NONE 12
9VG CBH OAG SINGLE BEGINDASH 13
9VG CAP CAR DOUBLE NONE 14
9VG CBE CAR SINGLE NONE 15
9VG CBE CBC SINGLE NONE 16
9VG CBG CBC SINGLE NONE 17
9VG CBG CBA DOUBLE NONE 18
9VG CAZ CBA SINGLE NONE 19
9VG CAZ CBK SINGLE NONE 20
9VG CBC OAE DOUBLE NONE 21
9VG CBA NAT SINGLE NONE 22
9VG CBH CBK SINGLE NONE 23
9VG CBH CAJ SINGLE NONE 24
9VG CBK OAV SINGLE BEGINWEDGE 25
9VG OAV CBJ SINGLE NONE 26
9VG CBK CBJ SINGLE NONE 27
9VG CAJ CAH TRIPLE NONE 28
9VG NAT CBI SINGLE NONE 29
9VG CBJ CBI SINGLE NONE 30
9VG CBJ CAX SINGLE BEGINDASH 31
9VG CAH CAL SINGLE ENDUPRIGHT 32
9VG CBI CAK SINGLE NONE 33
9VG CAB CAX SINGLE ENDDOWNRIGHT 34
9VG CAX CAN DOUBLE NONE 35
9VG CAK CAI TRIPLE NONE 36
9VG CAL CAM DOUBLE NONE 37
9VG CAI CAM SINGLE ENDUPRIGHT 38
9VG CAN CAW SINGLE ENDUPRIGHT 39
9VG CAW OAC DOUBLE NONE 40
9VG CAW OAU SINGLE NONE 41
9VG OAU CAA SINGLE NONE 42
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
9VG MurckoScaffold S1 scaffold 'O=C1c2ccccc2C(=O)c2c1ccc1c2N[C@H]2C#C/C=C\C#CC[C@@]13OC23' InChI=1S/C24H13NO3/c26-21-14-8-5-6-9-15(14)22(27)19-16(21)11-12-17-20(19)25-18-10-4-2-1-3-7-13-24(17)23(18)28-24/h1-2,5-6,8-9,11-12,18,23,25H,13H2/b2-1-/t18-,23-,24+/m0/s1 HFLLENAZPVLTPF-JLDAIMNESA-N
9VG phenyl F1 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
9VG Z419084966 F2 fragment NCC(O)Cc1ccccc1 InChI=1S/C9H13NO/c10-7-9(11)6-8-4-2-1-3-5-8/h1-5,9,11H,6-7,10H2 JIIXMZQZEAAIJX-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
9VG CBJ S1 1
9VG OAV S1 1
9VG CBK S1 1
9VG CAZ S1 1
9VG CAS S1 1
9VG CAY S1 1
9VG CBF S1 1
9VG CBB S1 1
9VG OAD S1 1
9VG CBD S1 1
9VG CAQ S1 1
9VG CAO S1 1
9VG CAP S1 1
9VG CAR S1 1
9VG CBE S1 1
9VG CBC S1 1
9VG OAE S1 1
9VG CBG S1 1
9VG CBA S1 1
9VG NAT S1 1
9VG CBI S1 1
9VG CAK S1 1
9VG CAI S1 1
9VG CAM S1 1
9VG CAL S1 1
9VG CAH S1 1
9VG CAJ S1 1
9VG CBH S1 1
9VG CAZ F1 1
9VG CAS F1 1
9VG CAY F1 1
9VG CBF F1 1
9VG CBG F1 1
9VG CBA F1 1
9VG CBD F1 2
9VG CAQ F1 2
9VG CAO F1 2
9VG CAP F1 2
9VG CAR F1 2
9VG CBE F1 2
9VG NAT F2 1
9VG CBI F2 1
9VG CBJ F2 1
9VG OAV F2 1
9VG CBK F2 1
9VG CAZ F2 1
9VG CAS F2 1
9VG CAY F2 1
9VG CBF F2 1
9VG CBG F2 1
9VG CBA F2 1
#
_pdbe_chem_comp_rdkit_properties.comp_id 9VG
_pdbe_chem_comp_rdkit_properties.exactmw 493.116
_pdbe_chem_comp_rdkit_properties.amw 493.471
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 8
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 3
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 6
_pdbe_chem_comp_rdkit_properties.NumHBD 3
_pdbe_chem_comp_rdkit_properties.NumHBA 8
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 37
_pdbe_chem_comp_rdkit_properties.NumAtoms 56
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 8
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.207
_pdbe_chem_comp_rdkit_properties.NumRings 6
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 4
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 2
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 4
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 238.064
_pdbe_chem_comp_rdkit_properties.tpsa 125.460
_pdbe_chem_comp_rdkit_properties.CrippenClogP 0.866
_pdbe_chem_comp_rdkit_properties.CrippenMR 128.026
_pdbe_chem_comp_rdkit_properties.chi0v 17.805
_pdbe_chem_comp_rdkit_properties.chi1v 10.034
_pdbe_chem_comp_rdkit_properties.chi2v 5.990
_pdbe_chem_comp_rdkit_properties.chi3v 5.990
_pdbe_chem_comp_rdkit_properties.chi4v 4.462
_pdbe_chem_comp_rdkit_properties.chi0n 36.805
_pdbe_chem_comp_rdkit_properties.chi1n 19.298
_pdbe_chem_comp_rdkit_properties.chi2n 5.990
_pdbe_chem_comp_rdkit_properties.chi3n 5.990
_pdbe_chem_comp_rdkit_properties.chi4n 4.462
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -4.630
_pdbe_chem_comp_rdkit_properties.kappa1 10.025
_pdbe_chem_comp_rdkit_properties.kappa2 7.682
_pdbe_chem_comp_rdkit_properties.kappa3 2.796
_pdbe_chem_comp_rdkit_properties.Phi 2.081
#
_pdbe_chem_comp_external_mappings.comp_id 9VG
_pdbe_chem_comp_external_mappings.source UniChem
_pdbe_chem_comp_external_mappings.resource PubChem
_pdbe_chem_comp_external_mappings.resource_id 137348867
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
9VG CAA 7.554 -0.399 -1.106 ETKDGv3 1
9VG OAU 6.159 -0.390 -0.827 ETKDGv3 2
9VG CAW 5.235 0.295 -1.621 ETKDGv3 3
9VG OAC 5.626 0.929 -2.639 ETKDGv3 4
9VG CAN 3.806 0.230 -1.247 ETKDGv3 5
9VG CAX 2.793 0.907 -1.827 ETKDGv3 6
9VG CAB 3.031 1.943 -2.897 ETKDGv3 7
9VG CBJ 1.373 0.729 -1.308 ETKDGv3 8
9VG OAV 0.457 0.740 -2.392 ETKDGv3 9
9VG CBK 0.477 -0.455 -1.643 ETKDGv3 10
9VG CAZ -0.841 -0.608 -0.860 ETKDGv3 11
9VG CAS -1.638 -1.682 -0.991 ETKDGv3 12
9VG CAY -2.960 -1.741 -0.338 ETKDGv3 13
9VG OAF -3.759 -2.867 -0.545 ETKDGv3 14
9VG CBF -3.386 -0.716 0.432 ETKDGv3 15
9VG CBB -4.733 -0.704 1.064 ETKDGv3 16
9VG OAD -5.522 -1.677 0.913 ETKDGv3 17
9VG CBD -5.173 0.459 1.870 ETKDGv3 18
9VG CAQ -6.563 0.502 2.400 ETKDGv3 19
9VG CAO -6.975 1.533 3.144 ETKDGv3 20
9VG CAP -6.053 2.640 3.447 ETKDGv3 21
9VG CAR -4.801 2.616 2.979 ETKDGv3 22
9VG CBE -4.326 1.477 2.147 ETKDGv3 23
9VG CBC -2.929 1.466 1.656 ETKDGv3 24
9VG OAE -2.107 2.286 2.148 ETKDGv3 25
9VG CBG -2.491 0.453 0.655 ETKDGv3 26
9VG CBA -1.302 0.519 -0.001 ETKDGv3 27
9VG NAT -0.422 1.642 0.127 ETKDGv3 28
9VG CBI 1.016 1.437 0.018 ETKDGv3 29
9VG CAK 1.466 0.526 1.091 ETKDGv3 30
9VG CAI 1.823 -0.404 1.774 ETKDGv3 31
9VG CAM 2.236 -1.667 2.353 ETKDGv3 32
9VG CAL 2.329 -2.768 1.584 ETKDGv3 33
9VG CAH 2.015 -2.696 0.173 ETKDGv3 34
9VG CAJ 1.705 -2.387 -0.952 ETKDGv3 35
9VG CBH 1.269 -1.684 -2.171 ETKDGv3 36
9VG OAG 0.475 -2.505 -2.983 ETKDGv3 37
9VG H1 7.739 -0.848 -2.105 ETKDGv3 38
9VG H2 7.954 0.637 -1.079 ETKDGv3 39
9VG H3 8.076 -1.006 -0.337 ETKDGv3 40
9VG H4 3.581 -0.433 -0.427 ETKDGv3 41
9VG H5 3.401 1.455 -3.823 ETKDGv3 42
9VG H6 3.765 2.698 -2.542 ETKDGv3 43
9VG H7 2.098 2.490 -3.147 ETKDGv3 44
9VG H8 -1.361 -2.526 -1.596 ETKDGv3 45
9VG H9 -3.449 -3.638 -1.124 ETKDGv3 46
9VG H10 -7.256 -0.302 2.187 ETKDGv3 47
9VG H11 -7.988 1.558 3.525 ETKDGv3 48
9VG H12 -6.392 3.473 4.050 ETKDGv3 49
9VG H13 -4.138 3.440 3.209 ETKDGv3 50
9VG H14 -0.792 2.617 0.190 ETKDGv3 51
9VG H15 1.547 2.410 0.098 ETKDGv3 52
9VG H16 2.470 -1.720 3.408 ETKDGv3 53
9VG H18 2.638 -3.710 2.017 ETKDGv3 54
9VG H20 2.162 -1.379 -2.757 ETKDGv3 55
9VG H21 1.077 -3.192 -3.374 ETKDGv3 56
#