Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 9VG

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 56


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 CAA C C1 N N N 0 -8.9 6.929 -2.165
2 OAU O O1 N N N 0 -9.057 6.23 -3.396
3 CAW C C2 N N N 0 -10.064 6.663 -4.2
4 OAC O O2 N N N 0 -10.621 7.763 -4.138
5 CAN C C3 N N N 0 -10.401 5.614 -5.235
6 CAX C C4 N N N 0 -11.495 5.758 -6.285
7 CAB C C5 N N N 0 -12.365 7.025 -6.351
8 CBJ C C6 S N N 0 -11.79 4.582 -7.242
9 OAV O O3 N N N 0 -12.208 5.022 -8.558
10 CBK C C7 S N N 0 -10.985 4.238 -8.527
11 CAZ C C8 N Y N 0 -11.235 2.963 -9.138
12 CAS C C9 N Y N 0 -10.511 2.551 -10.268
13 CAY C C10 N Y N 0 -10.803 1.347 -10.887
14 OAF O O4 N N N 0 -10.065 0.963 -11.971
15 CBF C C11 N Y N 0 -11.827 0.502 -10.428
16 CBB C C12 N N N 0 -12.089 -0.725 -11.081
17 OAD O O5 N N N 0 -11.422 -1.047 -12.078
18 CBD C C13 N Y N 0 -13.101 -1.578 -10.584
19 CAQ C C14 N Y N 0 -13.381 -2.806 -11.214
20 CAO C C15 N Y N 0 -14.387 -3.657 -10.733
21 CAP C C16 N Y N 0 -15.132 -3.285 -9.617
22 CAR C C17 N Y N 0 -14.87 -2.061 -8.983
23 CBE C C18 N Y N 0 -13.856 -1.202 -9.454
24 CBC C C19 N N N 0 -13.621 0.023 -8.813
25 OAE O O6 N N N 0 -14.315 0.329 -7.818
26 CBG C C20 N Y N 0 -12.588 0.886 -9.292
27 CBA C C21 N Y N 0 -12.299 2.115 -8.673
28 NAT N N1 N N N 0 -13.065 2.512 -7.533
29 CBI C C22 S N N 0 -12.392 3.353 -6.522
30 CAK C C23 N N N 0 -11.135 2.713 -5.974
31 CAI C C24 N N N 0 -10.05 2.196 -5.549
32 CAM C C25 N N N 0 -8.738 1.631 -5.085
33 CAL C C26 N N N 0 -7.67 2.146 -5.878
34 CAH C C27 N N N 0 -8.234 3.102 -6.841
35 CAJ C C28 N N N 0 -8.78 3.884 -7.646
36 CBH C C29 R N N 0 -9.491 4.835 -8.575
37 OAG O O7 N N N 0 -8.918 4.956 -9.871
38 H1 H H1 N N N 0 -8.061 6.495 -1.601
39 H2 H H2 N N N 0 -8.694 7.99 -2.37
40 H3 H H3 N N N 0 -9.823 6.842 -1.574
41 H4 H H4 N N N 0 -9.826 4.7 -5.23
42 H5 H H5 N N N 0 -12.013 7.751 -5.603
43 H6 H H6 N N N 0 -12.292 7.468 -7.355
44 H7 H H7 N N N 0 -13.412 6.762 -6.142
45 H8 H H8 N N N 0 -9.721 3.177 -10.657
46 H9 H H9 N N N 0 -10.378 0.123 -12.286
47 H10 H H10 N N N 0 -12.811 -3.098 -12.083
48 H11 H H11 N N N 0 -14.583 -4.597 -11.226
49 H12 H H12 N N N 0 -15.908 -3.935 -9.241
50 H13 H H13 N N N 0 -15.454 -1.773 -8.121
51 H14 H H14 N N N 0 -13.858 3.021 -7.867
52 H15 H H15 N N N 0 -13.075 3.66 -5.716
53 H16 H H16 N N N 0 -8.62 0.935 -4.268
54 H18 H H18 N N N 0 -6.627 1.88 -5.786
55 H20 H H20 N N N 0 -9.523 5.825 -8.096
56 H21 H H21 N N N 0 -8.041 5.315 -9.798