Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 9P0    

Bonds between two atoms of the molecule

Total Number of Bonds: 80


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C43 C41 C C sing 1.51 N N
2 C1 N2 C N sing 1.47 N N
3 C39 C38 C C sing 1.54 N N
4 C39 N40 C N sing 1.47 N N
5 C41 N40 C N sing 1.35 N N
6 C41 O42 C O doub 1.21 N N
7 O5 C4 O C doub 1.21 N N
8 O25 C23 O C doub 1.21 N N
9 C38 C37 C C sing 1.55 N N
10 N40 C35 N C sing 1.47 N N
11 N2 C4 N C sing 1.35 N N
12 N2 C3 N C sing 1.47 N N
13 C4 C6 C C sing 1.5 N N
14 O24 C23 O C sing 1.35 N N
15 C23 C20 C C sing 1.48 N N
16 C37 C35 C C sing 1.55 N N
17 C35 C33 C C sing 1.51 N N
18 O34 C33 O C doub 1.21 N N
19 C6 C8 C C sing 1.53 N N
20 C6 N46 C N sing 1.48 N N
21 C33 N32 C N sing 1.35 N N
22 C20 C21 C C doub 1.4 N Y
23 C20 C19 C C sing 1.4 N Y
24 C8 S9 C S sing 1.81 N N
25 C21 C22 C C sing 1.38 N Y
26 N46 C44 N C sing 1.37 N N
27 C19 C18 C C doub 1.38 N Y
28 N32 C30 N C sing 1.47 N N
29 C22 C17 C C doub 1.39 N Y
30 C44 C30 C C sing 1.51 N N
31 C44 O45 C O doub 1.21 N N
32 S9 C10 S C sing 1.82 N N
33 C10 C11 C C sing 1.51 N N
34 C18 C17 C C sing 1.39 N Y
35 C30 C29 C C sing 1.52 N N
36 C17 C16 C C sing 1.48 N N
37 C11 C16 C C doub 1.39 N Y
38 C11 C12 C C sing 1.39 N Y
39 C16 C15 C C sing 1.4 N Y
40 C29 O28 C O sing 1.44 N N
41 O28 C26 O C sing 1.34 N N
42 C12 C26 C C sing 1.48 N N
43 C12 C13 C C doub 1.4 N Y
44 C15 C14 C C doub 1.38 N Y
45 C26 O27 C O doub 1.22 N N
46 C13 C14 C C sing 1.38 N Y
47 C1 H1 C H sing 1.09 N N
48 C1 H2 C H sing 1.09 N N
49 C1 H3 C H sing 1.09 N N
50 C3 H4 C H sing 1.09 N N
51 C3 H5 C H sing 1.09 N N
52 C3 H6 C H sing 1.09 N N
53 C8 H7 C H sing 1.09 N N
54 C8 H8 C H sing 1.09 N N
55 C10 H9 C H sing 1.08 N N
56 C10 H10 C H sing 1.09 N N
57 C13 H11 C H sing 1.08 N N
58 C14 H12 C H sing 1.08 N N
59 C15 H13 C H sing 1.08 N N
60 C19 H14 C H sing 1.08 N N
61 C21 H15 C H sing 1.08 N N
62 C22 H16 C H sing 1.08 N N
63 C30 H17 C H sing 1.09 N N
64 C35 H18 C H sing 1.09 N N
65 C6 H19 C H sing 1.11 N N
66 C18 H20 C H sing 1.08 N N
67 O24 H21 O H sing 0.97 N N
68 C29 H22 C H sing 1.1 N N
69 C29 H23 C H sing 1.1 N N
70 N32 H24 N H sing 0.97 N N
71 C37 H25 C H sing 1.09 N N
72 C37 H26 C H sing 1.09 N N
73 C38 H27 C H sing 1.09 N N
74 C38 H28 C H sing 1.09 N N
75 C39 H29 C H sing 1.09 N N
76 C39 H30 C H sing 1.09 N N
77 C43 H31 C H sing 1.09 N N
78 C43 H32 C H sing 1.09 N N
79 C43 H33 C H sing 1.09 N N
80 N46 H34 N H sing 0.99 N N