Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 9P0

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 77


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N N N 0 0.48 -3.399 3.829
2 C3 C C2 N N N 0 0.417 -4.371 1.485
3 O5 O O1 N N N 0 1.089 -1.073 2.612
4 C8 C C3 N N N 0 -0.301 -1.708 -0.285
5 C10 C C4 N N N 0 -2.092 0.452 -0.713
6 C11 C C5 N Y N 0 -2.602 1.752 -0.146
7 C12 C C6 N Y N 0 -1.689 2.744 0.207
8 C13 C C7 N Y N 0 -2.144 3.949 0.752
9 C14 C C8 N Y N 0 -3.493 4.165 0.936
10 C15 C C9 N Y N 0 -4.403 3.192 0.578
11 C16 C C10 N Y N 0 -3.961 1.978 0.041
12 C19 C C11 N Y N 0 -5.876 -0.612 -1.893
13 C20 C C12 N Y N 0 -6.86 -0.971 -0.969
14 C21 C C13 N Y N 0 -6.892 -0.36 0.288
15 C22 C C14 N Y N 0 -5.953 0.593 0.614
16 O28 O O2 N N N 0 0.629 3.094 0.878
17 C30 C C15 R N N 0 2.483 1.687 0.053
18 C33 C C16 N N N 0 4.637 0.677 -0.491
19 C35 C C17 S N N 0 6.095 0.433 -0.2
20 N2 N N1 N N N 0 0.616 -3.228 2.38
21 C4 C C18 N N N 0 0.924 -2.019 1.871
22 C6 C C19 S N N 0 1.063 -1.843 0.387
23 S9 S S1 N N N 0 -1.337 -0.527 0.618
24 O27 O O5 N N N 0 0.162 1.969 -0.978
25 C17 C C20 N Y N 0 -4.972 0.95 -0.311
26 C18 C C21 N Y N 0 -4.939 0.342 -1.566
27 C23 C C22 N N N 0 -7.866 -1.992 -1.319
28 O24 O O3 N N N 0 -7.834 -2.58 -2.531
29 O25 O O4 N N N 0 -8.722 -2.303 -0.515
30 C26 C C23 N N N 0 -0.234 2.567 0.006
31 C29 C C24 N N N 0 2.053 2.997 0.699
32 N32 N N2 N N N 0 3.904 1.448 0.337
33 O34 O O6 N N N 0 4.122 0.181 -1.471
34 C37 C C25 N N N 0 6.951 1.626 -0.692
35 C38 C C26 N N N 0 8.334 0.955 -0.896
36 C39 C C27 N N N 0 7.963 -0.455 -1.403
37 N40 N N3 N N N 0 6.584 -0.727 -0.968
38 C41 C C28 N N N 0 5.884 -1.849 -1.23
39 O42 O O7 N N N 0 4.749 -1.966 -0.819
40 C43 C C29 N N N 0 6.513 -2.958 -2.035
41 C44 C C30 N N N 0 1.68 0.523 0.591
42 O45 O O8 N N N 0 0.887 0.709 1.485
43 N46 N N4 N N N 0 1.919 -0.697 0.017
44 H1 H H1 N N N 0 0.663 -2.447 4.326
45 H2 H H2 N N N 0 -0.527 -3.743 4.061
46 H3 H H3 N N N 0 1.205 -4.136 4.177
47 H4 H H4 N N N 0 -0.633 -4.427 1.197
48 H5 H H5 N N N 0 1.032 -4.246 0.595
49 H6 H H6 N N N 0 0.702 -5.288 1.999
50 H7 H H7 N N N 0 -0.168 -1.36 -1.312
51 H11 H H11 N N N 0 -1.435 4.719 1.021
52 H8 H H8 N N N 0 -0.797 -2.682 -0.304
53 H9 H H9 N N N 0 -2.884 -0.12 -1.183
54 H10 H H10 N N N 0 -1.333 0.662 -1.473
55 H12 H H12 N N N 0 -3.84 5.094 1.362
56 H13 H H13 N N N 0 -5.46 3.361 0.716
57 H14 H H14 N N N 0 -5.847 -1.086 -2.864
58 H15 H H15 N N N 0 -7.652 -0.636 1.004
59 H16 H H16 N N N 0 -5.978 1.065 1.585
60 H17 H H17 N N N 0 2.349 1.741 -1.029
61 H18 H H18 N N N 0 6.246 0.272 0.867
62 H19 H H19 N N N 0 1.538 -2.761 -0.014
63 H20 H H20 N N N 0 -4.175 0.615 -2.278
64 H24 H H24 N N N 0 4.316 1.845 1.12
65 H21 H H21 N N N 0 -8.514 -3.244 -2.715
66 H22 H H22 N N N 0 2.396 3.83 0.073
67 H23 H H23 N N N 0 2.548 3.095 1.675
68 H25 H H25 N N N 0 6.566 2.022 -1.632
69 H26 H H26 N N N 0 7.003 2.408 0.066
70 H27 H H27 N N N 0 8.918 1.492 -1.643
71 H28 H H28 N N N 0 8.878 0.897 0.047
72 H29 H H29 N N N 0 8.022 -0.484 -2.491
73 H30 H H30 N N N 0 8.639 -1.194 -0.973
74 H31 H H31 N N N 0 7.021 -3.65 -1.364
75 H32 H H32 N N N 0 5.738 -3.49 -2.587
76 H33 H H33 N N N 0 7.233 -2.535 -2.735
77 H34 H H34 N N N 0 2.65 -0.801 -0.639