data_9P0
#
_chem_comp.id 9P0
_chem_comp.name
"4-[(5S,8R)-5-(dimethylcarbamoyl)-8-[[(2S)-1-ethanoylpyrrolidin-2-yl]carbonylamino]-7,11-bis(oxidanylidene)-10-oxa-3-thia-6-azabicyclo[10.4.0]hexadeca-1(16),12,14-trien-16-yl]benzoic acid"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C30 H34 N4 O8 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2021-11-19
_chem_comp.pdbx_modified_date 2022-08-22
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 610.678
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 9P0
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 7Q96
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBE
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
9P0 C1 C1 C 0 1 N N N N N N -19.631 24.955 -28.490 0.480 -3.399 3.829 C1 9P0 1
9P0 C3 C2 C 0 1 N N N N N N -18.987 25.807 -26.281 0.417 -4.371 1.485 C3 9P0 2
9P0 O5 O1 O 0 1 N N N N N N -22.077 24.414 -27.550 1.089 -1.073 2.612 O5 9P0 3
9P0 C8 C3 C 0 1 N N N N N N -23.216 25.024 -25.120 -0.301 -1.708 -0.285 C8 9P0 4
9P0 C10 C4 C 0 1 N N N N N N -23.888 22.899 -23.240 -2.092 0.452 -0.713 C10 9P0 5
9P0 C11 C5 C 0 1 Y N N N N N -24.479 22.498 -21.909 -2.602 1.752 -0.146 C11 9P0 6
9P0 C12 C6 C 0 1 Y N N N N N -23.716 22.232 -20.742 -1.689 2.744 0.207 C12 9P0 7
9P0 C13 C7 C 0 1 Y N N N N N -24.369 21.884 -19.553 -2.144 3.949 0.752 C13 9P0 8
9P0 C14 C8 C 0 1 Y N N N N N -25.757 21.819 -19.497 -3.493 4.165 0.936 C14 9P0 9
9P0 C15 C9 C 0 1 Y N N N N N -26.527 22.083 -20.623 -4.403 3.192 0.578 C15 9P0 10
9P0 C16 C10 C 0 1 Y N N N N N -25.898 22.430 -21.817 -3.961 1.978 0.041 C16 9P0 11
9P0 C19 C11 C 0 1 Y N N N N N -28.465 23.844 -24.221 -5.876 -0.612 -1.893 C19 9P0 12
9P0 C20 C12 C 0 1 Y N N N N N -28.504 22.817 -25.174 -6.860 -0.971 -0.969 C20 9P0 13
9P0 C21 C13 C 0 1 Y N N N N N -27.696 21.695 -25.016 -6.892 -0.360 0.288 C21 9P0 14
9P0 C22 C14 C 0 1 Y N N N N N -26.865 21.612 -23.899 -5.953 0.593 0.614 C22 9P0 15
9P0 O28 O2 O 0 1 N N N N N N -21.498 22.851 -21.522 0.629 3.094 0.878 O28 9P0 16
9P0 C30 C15 C 0 1 N N R N N N -19.616 22.686 -23.094 2.483 1.687 0.053 C30 9P0 17
9P0 C33 C16 C 0 1 N N N N N N -19.078 21.539 -25.181 4.637 0.677 -0.491 C33 9P0 18
9P0 C35 C17 C 0 1 N N S N N N -19.347 20.287 -25.945 6.095 0.433 -0.200 C35 9P0 19
9P0 N2 N1 N 0 1 N N N N N N -20.009 25.235 -27.136 0.616 -3.228 2.380 N2 9P0 20
9P0 C4 C18 C 0 1 N N N N N N -21.297 24.896 -26.748 0.924 -2.019 1.871 C4 9P0 21
9P0 C6 C19 C 0 1 N N S N N N -21.691 25.091 -25.300 1.063 -1.843 0.387 C6 9P0 22
9P0 S9 S1 S 0 1 N N N N N N -23.774 24.713 -23.393 -1.337 -0.527 0.618 S9 9P0 23
9P0 C17 C20 C 0 1 Y N N N N N -26.804 22.629 -22.945 -4.972 0.950 -0.311 C17 9P0 24
9P0 C18 C21 C 0 1 Y N N N N N -27.614 23.756 -23.106 -4.939 0.342 -1.566 C18 9P0 25
9P0 C23 C22 C 0 1 N N N N N N -29.358 22.868 -26.382 -7.866 -1.992 -1.319 C23 9P0 26
9P0 O24 O3 O 0 1 N N N N N N -30.557 23.094 -26.400 -7.834 -2.580 -2.531 O24 9P0 27
9P0 O25 O4 O 0 1 N N N N N N -28.583 22.613 -27.470 -8.722 -2.303 -0.515 O25 9P0 28
9P0 C26 C23 C 0 1 N N N N N N -22.237 22.214 -20.583 -0.234 2.567 0.006 C26 9P0 29
9P0 O27 O5 O 0 1 N N N N N N -21.737 21.630 -19.636 0.162 1.969 -0.978 O27 9P0 30
9P0 C29 C24 C 0 1 N N N N N N -20.152 22.358 -21.702 2.053 2.997 0.699 C29 9P0 31
9P0 N32 N2 N 0 1 N N N N N N -19.827 21.595 -24.028 3.904 1.448 0.337 N32 9P0 32
9P0 O34 O6 O 0 1 N N N N N N -18.270 22.376 -25.564 4.122 0.181 -1.471 O34 9P0 33
9P0 C37 C25 C 0 1 N N N N N N -18.027 19.517 -26.010 6.951 1.626 -0.692 C37 9P0 34
9P0 C38 C26 C 0 1 N N N N N N -18.088 18.906 -27.409 8.334 0.955 -0.896 C38 9P0 35
9P0 C39 C27 C 0 1 N N N N N N -18.653 20.061 -28.228 7.963 -0.455 -1.403 C39 9P0 36
9P0 N40 N3 N 0 1 N N N N N N -19.614 20.719 -27.325 6.584 -0.727 -0.968 N40 9P0 37
9P0 C41 C28 C 0 1 N N N N N N -20.933 20.939 -27.699 5.884 -1.849 -1.230 C41 9P0 38
9P0 O42 O7 O 0 1 N N N N N N -21.892 20.862 -26.935 4.749 -1.966 -0.819 O42 9P0 39
9P0 C43 C29 C 0 1 N N N N N N -21.122 21.296 -29.153 6.513 -2.958 -2.035 C43 9P0 40
9P0 C44 C30 C 0 1 N N N N N N -20.269 23.999 -23.549 1.680 0.523 0.591 C44 9P0 41
9P0 O45 O8 O 0 1 N N N N N N -20.137 25.022 -22.901 0.887 0.709 1.485 O45 9P0 42
9P0 N46 N4 N 0 1 N N N N N N -21.047 23.946 -24.695 1.919 -0.697 0.017 N46 9P0 43
9P0 H1 H1 H 0 1 N N N N N N -18.591 25.274 -28.654 0.663 -2.447 4.326 H1 9P0 44
9P0 H2 H2 H 0 1 N N N N N N -19.717 23.875 -28.679 -0.527 -3.743 4.061 H2 9P0 45
9P0 H3 H3 H 0 1 N N N N N N -20.295 25.501 -29.176 1.205 -4.136 4.177 H3 9P0 46
9P0 H4 H4 H 0 1 N N N N N N -19.400 25.973 -25.275 -0.633 -4.427 1.197 H4 9P0 47
9P0 H5 H5 H 0 1 N N N N N N -18.134 25.116 -26.217 1.032 -4.246 0.595 H5 9P0 48
9P0 H6 H6 H 0 1 N N N N N N -18.651 26.766 -26.702 0.702 -5.288 1.999 H6 9P0 49
9P0 H7 H7 H 0 1 N N N N N N -23.642 25.983 -25.450 -0.168 -1.360 -1.312 H7 9P0 50
9P0 H8 H8 H 0 1 N N N N N N -23.601 24.213 -25.756 -0.797 -2.682 -0.304 H8 9P0 51
9P0 H9 H9 H 0 1 N N N N N N -24.526 22.510 -24.047 -2.884 -0.120 -1.183 H9 9P0 52
9P0 H10 H10 H 0 1 N N N N N N -22.880 22.468 -23.329 -1.333 0.662 -1.473 H10 9P0 53
9P0 H11 H11 H 0 1 N N N N N N -23.788 21.664 -18.670 -1.435 4.719 1.021 H11 9P0 54
9P0 H12 H12 H 0 1 N N N N N N -26.242 21.560 -18.567 -3.840 5.094 1.362 H12 9P0 55
9P0 H13 H13 H 0 1 N N N N N N -27.604 22.020 -20.573 -5.460 3.361 0.716 H13 9P0 56
9P0 H14 H14 H 0 1 N N N N N N -29.096 24.712 -24.345 -5.847 -1.086 -2.864 H14 9P0 57
9P0 H15 H15 H 0 1 N N N N N N -27.712 20.900 -25.747 -7.652 -0.636 1.004 H15 9P0 58
9P0 H16 H16 H 0 1 N N N N N N -26.250 20.734 -23.768 -5.978 1.065 1.585 H16 9P0 59
9P0 H17 H17 H 0 1 N N N N N N -18.535 22.866 -23.002 2.349 1.741 -1.029 H17 9P0 60
9P0 H18 H18 H 0 1 N N N N N N -20.161 19.687 -25.512 6.246 0.272 0.867 H18 9P0 61
9P0 H19 H19 H 0 1 N N N N N N -21.296 26.040 -24.909 1.538 -2.761 -0.014 H19 9P0 62
9P0 H20 H20 H 0 1 N N N N N N -27.586 24.554 -22.379 -4.175 0.615 -2.278 H20 9P0 63
9P0 H21 H21 H 0 1 N N N N N N -30.872 23.065 -27.296 -8.514 -3.244 -2.715 H21 9P0 64
9P0 H22 H22 H 0 1 N N N N N N -20.150 21.266 -21.567 2.396 3.830 0.073 H22 9P0 65
9P0 H23 H23 H 0 1 N N N N N N -19.498 22.822 -20.949 2.548 3.095 1.675 H23 9P0 66
9P0 H24 H24 H 0 1 N N N N N N -20.510 20.891 -23.835 4.316 1.845 1.120 H24 9P0 67
9P0 H25 H25 H 0 1 N N N N N N -17.979 18.738 -25.235 6.566 2.022 -1.632 H25 9P0 68
9P0 H26 H26 H 0 1 N N N N N N -17.165 20.192 -25.905 7.003 2.408 0.066 H26 9P0 69
9P0 H27 H27 H 0 1 N N N N N N -18.755 18.032 -27.436 8.918 1.492 -1.643 H27 9P0 70
9P0 H28 H28 H 0 1 N N N N N N -17.088 18.615 -27.763 8.878 0.897 0.047 H28 9P0 71
9P0 H29 H29 H 0 1 N N N N N N -17.854 20.758 -28.520 8.022 -0.484 -2.491 H29 9P0 72
9P0 H30 H30 H 0 1 N N N N N N -19.160 19.687 -29.129 8.639 -1.194 -0.973 H30 9P0 73
9P0 H31 H31 H 0 1 N N N N N N -22.191 21.455 -29.356 7.021 -3.650 -1.364 H31 9P0 74
9P0 H32 H32 H 0 1 N N N N N N -20.565 22.217 -29.380 5.738 -3.490 -2.587 H32 9P0 75
9P0 H33 H33 H 0 1 N N N N N N -20.747 20.476 -29.783 7.233 -2.535 -2.735 H33 9P0 76
9P0 H34 H34 H 0 1 N N N N N N -21.171 23.056 -25.133 2.650 -0.801 -0.639 H34 9P0 77
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
9P0 C43 C41 SING N N 1
9P0 C1 N2 SING N N 2
9P0 C39 C38 SING N N 3
9P0 C39 N40 SING N N 4
9P0 C41 N40 SING N N 5
9P0 C41 O42 DOUB N N 6
9P0 O5 C4 DOUB N N 7
9P0 O25 C23 DOUB N N 8
9P0 C38 C37 SING N N 9
9P0 N40 C35 SING N N 10
9P0 N2 C4 SING N N 11
9P0 N2 C3 SING N N 12
9P0 C4 C6 SING N N 13
9P0 O24 C23 SING N N 14
9P0 C23 C20 SING N N 15
9P0 C37 C35 SING N N 16
9P0 C35 C33 SING N N 17
9P0 O34 C33 DOUB N N 18
9P0 C6 C8 SING N N 19
9P0 C6 N46 SING N N 20
9P0 C33 N32 SING N N 21
9P0 C20 C21 DOUB Y N 22
9P0 C20 C19 SING Y N 23
9P0 C8 S9 SING N N 24
9P0 C21 C22 SING Y N 25
9P0 N46 C44 SING N N 26
9P0 C19 C18 DOUB Y N 27
9P0 N32 C30 SING N N 28
9P0 C22 C17 DOUB Y N 29
9P0 C44 C30 SING N N 30
9P0 C44 O45 DOUB N N 31
9P0 S9 C10 SING N N 32
9P0 C10 C11 SING N N 33
9P0 C18 C17 SING Y N 34
9P0 C30 C29 SING N N 35
9P0 C17 C16 SING N N 36
9P0 C11 C16 DOUB Y N 37
9P0 C11 C12 SING Y N 38
9P0 C16 C15 SING Y N 39
9P0 C29 O28 SING N N 40
9P0 O28 C26 SING N N 41
9P0 C12 C26 SING N N 42
9P0 C12 C13 DOUB Y N 43
9P0 C15 C14 DOUB Y N 44
9P0 C26 O27 DOUB N N 45
9P0 C13 C14 SING Y N 46
9P0 C1 H1 SING N N 47
9P0 C1 H2 SING N N 48
9P0 C1 H3 SING N N 49
9P0 C3 H4 SING N N 50
9P0 C3 H5 SING N N 51
9P0 C3 H6 SING N N 52
9P0 C8 H7 SING N N 53
9P0 C8 H8 SING N N 54
9P0 C10 H9 SING N N 55
9P0 C10 H10 SING N N 56
9P0 C13 H11 SING N N 57
9P0 C14 H12 SING N N 58
9P0 C15 H13 SING N N 59
9P0 C19 H14 SING N N 60
9P0 C21 H15 SING N N 61
9P0 C22 H16 SING N N 62
9P0 C30 H17 SING N N 63
9P0 C35 H18 SING N N 64
9P0 C6 H19 SING N N 65
9P0 C18 H20 SING N N 66
9P0 O24 H21 SING N N 67
9P0 C29 H22 SING N N 68
9P0 C29 H23 SING N N 69
9P0 N32 H24 SING N N 70
9P0 C37 H25 SING N N 71
9P0 C37 H26 SING N N 72
9P0 C38 H27 SING N N 73
9P0 C38 H28 SING N N 74
9P0 C39 H29 SING N N 75
9P0 C39 H30 SING N N 76
9P0 C43 H31 SING N N 77
9P0 C43 H32 SING N N 78
9P0 C43 H33 SING N N 79
9P0 N46 H34 SING N N 80
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
9P0 InChI InChI 1.06 InChI=1S/C30H34N4O8S/c1-17(35)34-13-5-8-25(34)27(37)31-23-14-42-30(41)21-7-4-6-20(18-9-11-19(12-10-18)29(39)40)22(21)15-43-16-24(32-26(23)36)28(38)33(2)3/h4,6-7,9-12,23-25H,5,8,13-16H2,1-3H3,(H,31,37)(H,32,36)(H,39,40)/t23-,24-,25+/m1/s1
9P0 InChIKey InChI 1.06 RNGXYARCEQWNBD-SDHSZQHLSA-N
9P0 SMILES_CANONICAL CACTVS 3.385 CN(C)C(=O)[C@H]1CSCc2c(cccc2c3ccc(cc3)C(O)=O)C(=O)OC[C@@H](NC(=O)[C@@H]4CCCN4C(C)=O)C(=O)N1
9P0 SMILES CACTVS 3.385 CN(C)C(=O)[CH]1CSCc2c(cccc2c3ccc(cc3)C(O)=O)C(=O)OC[CH](NC(=O)[CH]4CCCN4C(C)=O)C(=O)N1
9P0 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 CC(=O)N1CCC[C@H]1C(=O)N[C@@H]2COC(=O)c3cccc(c3CSC[C@@H](NC2=O)C(=O)N(C)C)c4ccc(cc4)C(=O)O
9P0 SMILES "OpenEye OEToolkits" 2.0.7 CC(=O)N1CCCC1C(=O)NC2COC(=O)c3cccc(c3CSCC(NC2=O)C(=O)N(C)C)c4ccc(cc4)C(=O)O
#
_pdbx_chem_comp_identifier.comp_id 9P0
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.7
_pdbx_chem_comp_identifier.identifier
"4-[(5~{S},8~{R})-5-(dimethylcarbamoyl)-8-[[(2~{S})-1-ethanoylpyrrolidin-2-yl]carbonylamino]-7,11-bis(oxidanylidene)-10-oxa-3-thia-6-azabicyclo[10.4.0]hexadeca-1(16),12,14-trien-16-yl]benzoic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
9P0 'Create component' 2021-11-19 PDBE
9P0 'Initial release' 2022-03-16 RCSB
9P0 'Modify descriptor' 2022-08-22 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
9P0 C1 C 3.000 -2.082 1
9P0 C3 C 3.994 0.319 2
9P0 O5 O 5.772 -3.230 3
9P0 C8 C 6.378 0.620 4
9P0 C10 C 8.628 1.919 5
9P0 C11 C 9.927 2.669 6
9P0 C12 C 11.226 1.919 7
9P0 C13 C 12.591 2.679 8
9P0 C14 C 12.603 4.241 9
9P0 C15 C 11.250 5.022 10
9P0 C16 C 9.902 4.231 11
9P0 C19 C 7.270 7.201 12
9P0 C20 C 5.980 6.436 13
9P0 C21 C 5.997 4.936 14
9P0 C22 C 7.305 4.201 15
9P0 O28 O 10.574 -0.907 16
9P0 C30 C 9.902 -3.416 17
9P0 C33 C 11.739 -5.254 18
9P0 C35 C 12.127 -6.702 19
9P0 N2 N 4.190 -1.168 20
9P0 C4 C 5.576 -1.742 21
9P0 C6 C 6.766 -0.829 22
9P0 S9 S 7.128 1.919 23
9P0 C17 C 8.595 4.966 24
9P0 C18 C 8.578 6.466 25
9P0 C23 C 4.672 7.171 26
9P0 O24 O 3.382 6.406 27
9P0 O25 O 4.655 8.671 28
9P0 C26 C 11.226 0.419 29
9P0 O27 O 12.675 0.030 30
9P0 C29 C 10.963 -2.356 31
9P0 N32 N 10.290 -4.865 32
9P0 O34 O 12.800 -4.193 33
9P0 C37 C 11.183 -7.868 34
9P0 C38 C 12.000 -9.126 35
9P0 C39 C 13.449 -8.738 36
9P0 N40 N 13.528 -7.240 37
9P0 C41 C 14.786 -6.423 38
9P0 O42 O 16.122 -7.104 39
9P0 C43 C 14.707 -4.925 40
9P0 C44 C 8.453 -3.028 41
9P0 O45 O 7.393 -4.089 42
9P0 N46 N 8.065 -1.579 43
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
9P0 C43 C41 SINGLE NONE 1
9P0 C1 N2 SINGLE NONE 2
9P0 C39 C38 SINGLE NONE 3
9P0 C39 N40 SINGLE NONE 4
9P0 C41 N40 SINGLE NONE 5
9P0 C41 O42 DOUBLE NONE 6
9P0 O5 C4 DOUBLE NONE 7
9P0 O25 C23 DOUBLE NONE 8
9P0 C38 C37 SINGLE NONE 9
9P0 N40 C35 SINGLE NONE 10
9P0 N2 C4 SINGLE NONE 11
9P0 N2 C3 SINGLE NONE 12
9P0 C6 C4 SINGLE BEGINWEDGE 13
9P0 O24 C23 SINGLE NONE 14
9P0 C23 C20 SINGLE NONE 15
9P0 C37 C35 SINGLE NONE 16
9P0 C35 C33 SINGLE BEGINWEDGE 17
9P0 O34 C33 DOUBLE NONE 18
9P0 C6 C8 SINGLE NONE 19
9P0 C6 N46 SINGLE NONE 20
9P0 C33 N32 SINGLE NONE 21
9P0 C20 C21 SINGLE NONE 22
9P0 C20 C19 DOUBLE NONE 23
9P0 C8 S9 SINGLE NONE 24
9P0 C21 C22 DOUBLE NONE 25
9P0 N46 C44 SINGLE NONE 26
9P0 C19 C18 SINGLE NONE 27
9P0 C30 N32 SINGLE BEGINWEDGE 28
9P0 C22 C17 SINGLE NONE 29
9P0 C44 C30 SINGLE NONE 30
9P0 C44 O45 DOUBLE NONE 31
9P0 S9 C10 SINGLE NONE 32
9P0 C10 C11 SINGLE NONE 33
9P0 C18 C17 DOUBLE NONE 34
9P0 C30 C29 SINGLE NONE 35
9P0 C17 C16 SINGLE NONE 36
9P0 C11 C16 DOUBLE NONE 37
9P0 C11 C12 SINGLE NONE 38
9P0 C16 C15 SINGLE NONE 39
9P0 C29 O28 SINGLE NONE 40
9P0 O28 C26 SINGLE NONE 41
9P0 C12 C26 SINGLE NONE 42
9P0 C12 C13 DOUBLE NONE 43
9P0 C15 C14 DOUBLE NONE 44
9P0 C26 O27 DOUBLE NONE 45
9P0 C13 C14 SINGLE NONE 46
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
9P0 MurckoScaffold S1 scaffold 'O=C1OC[C@@H](NC(=O)[C@@H]2CCCN2)C(=O)NCCSCc2c1cccc2-c1ccccc1' InChI=1S/C24H27N3O4S/c28-22-21(27-23(29)20-10-5-11-25-20)14-31-24(30)18-9-4-8-17(16-6-2-1-3-7-16)19(18)15-32-13-12-26-22/h1-4,6-9,20-21,25H,5,10-15H2,(H,26,28)(H,27,29)/t20-,21+/m0/s1 YESDYMOJMOIKHO-LEWJYISDSA-N
9P0 amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
9P0 peptide F2 fragment NCC=O InChI=1S/C2H5NO/c3-1-2-4/h2H,1,3H2 LYIIBVSRGJSHAV-UHFFFAOYSA-N
9P0 phenyl F3 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
9P0 C8 S1 1
9P0 C10 S1 1
9P0 C11 S1 1
9P0 C12 S1 1
9P0 C13 S1 1
9P0 C14 S1 1
9P0 C15 S1 1
9P0 C16 S1 1
9P0 C19 S1 1
9P0 C20 S1 1
9P0 C21 S1 1
9P0 C22 S1 1
9P0 O28 S1 1
9P0 C30 S1 1
9P0 C33 S1 1
9P0 C35 S1 1
9P0 C6 S1 1
9P0 S9 S1 1
9P0 C17 S1 1
9P0 C18 S1 1
9P0 C26 S1 1
9P0 O27 S1 1
9P0 C29 S1 1
9P0 N32 S1 1
9P0 O34 S1 1
9P0 C37 S1 1
9P0 C38 S1 1
9P0 C39 S1 1
9P0 N40 S1 1
9P0 C44 S1 1
9P0 O45 S1 1
9P0 N46 S1 1
9P0 N2 F1 1
9P0 C4 F1 1
9P0 O5 F1 1
9P0 C6 F1 1
9P0 N32 F1 2
9P0 C33 F1 2
9P0 O34 F1 2
9P0 C35 F1 2
9P0 N40 F1 3
9P0 C41 F1 3
9P0 O42 F1 3
9P0 C43 F1 3
9P0 N46 F1 4
9P0 C44 F1 4
9P0 O45 F1 4
9P0 C30 F1 4
9P0 O5 F2 1
9P0 C4 F2 1
9P0 C6 F2 1
9P0 N46 F2 1
9P0 O34 F2 2
9P0 C33 F2 2
9P0 C35 F2 2
9P0 N40 F2 2
9P0 O45 F2 3
9P0 C44 F2 3
9P0 C30 F2 3
9P0 N32 F2 3
9P0 C11 F3 1
9P0 C16 F3 1
9P0 C15 F3 1
9P0 C14 F3 1
9P0 C13 F3 1
9P0 C12 F3 1
9P0 C19 F3 2
9P0 C20 F3 2
9P0 C21 F3 2
9P0 C22 F3 2
9P0 C17 F3 2
9P0 C18 F3 2
#
_pdbe_chem_comp_rdkit_properties.comp_id 9P0
_pdbe_chem_comp_rdkit_properties.exactmw 610.210
_pdbe_chem_comp_rdkit_properties.amw 610.689
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 12
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 3
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 8
_pdbe_chem_comp_rdkit_properties.NumHBD 3
_pdbe_chem_comp_rdkit_properties.NumHBA 9
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 43
_pdbe_chem_comp_rdkit_properties.NumAtoms 77
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 13
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 4
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.400
_pdbe_chem_comp_rdkit_properties.NumRings 4
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 3
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 300.637
_pdbe_chem_comp_rdkit_properties.tpsa 162.420
_pdbe_chem_comp_rdkit_properties.CrippenClogP 0.980
_pdbe_chem_comp_rdkit_properties.CrippenMR 156.126
_pdbe_chem_comp_rdkit_properties.chi0v 21.280
_pdbe_chem_comp_rdkit_properties.chi1v 11.548
_pdbe_chem_comp_rdkit_properties.chi2v 5.314
_pdbe_chem_comp_rdkit_properties.chi3v 5.314
_pdbe_chem_comp_rdkit_properties.chi4v 3.446
_pdbe_chem_comp_rdkit_properties.chi0n 54.463
_pdbe_chem_comp_rdkit_properties.chi1n 27.534
_pdbe_chem_comp_rdkit_properties.chi2n 4.712
_pdbe_chem_comp_rdkit_properties.chi3n 4.712
_pdbe_chem_comp_rdkit_properties.chi4n 2.859
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -4.390
_pdbe_chem_comp_rdkit_properties.kappa1 9.553
_pdbe_chem_comp_rdkit_properties.kappa2 13.722
_pdbe_chem_comp_rdkit_properties.kappa3 7.340
_pdbe_chem_comp_rdkit_properties.Phi 3.049
#
_pdbe_chem_comp_external_mappings.comp_id 9P0
_pdbe_chem_comp_external_mappings.source UniChem
_pdbe_chem_comp_external_mappings.resource PubChem
_pdbe_chem_comp_external_mappings.resource_id 162678570
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
9P0 C1 0.191 4.158 -3.053 ETKDGv3 1
9P0 C3 -0.162 5.704 -1.070 ETKDGv3 2
9P0 O5 0.785 3.649 0.540 ETKDGv3 3
9P0 C8 1.965 1.225 -0.163 ETKDGv3 4
9P0 C10 2.405 -1.234 0.890 ETKDGv3 5
9P0 C11 2.604 -2.729 0.759 ETKDGv3 6
9P0 C12 1.427 -3.666 0.830 ETKDGv3 7
9P0 C13 1.642 -4.995 0.817 ETKDGv3 8
9P0 C14 3.002 -5.539 0.683 ETKDGv3 9
9P0 C15 4.045 -4.717 0.572 ETKDGv3 10
9P0 C16 3.852 -3.251 0.609 ETKDGv3 11
9P0 C19 7.016 -1.314 1.482 ETKDGv3 12
9P0 C20 7.371 -0.779 0.298 ETKDGv3 13
9P0 C21 6.539 -1.064 -0.900 ETKDGv3 14
9P0 C22 5.450 -1.836 -0.801 ETKDGv3 15
9P0 O28 -0.386 -2.077 0.162 ETKDGv3 16
9P0 C30 -1.899 -0.457 -0.831 ETKDGv3 17
9P0 C33 -4.148 0.416 0.081 ETKDGv3 18
9P0 C35 -5.590 0.752 -0.200 ETKDGv3 19
9P0 N2 0.255 4.405 -1.608 ETKDGv3 20
9P0 C4 0.723 3.387 -0.694 ETKDGv3 21
9P0 C6 1.092 1.996 -1.174 ETKDGv3 22
9P0 S9 2.284 -0.475 -0.765 ETKDGv3 23
9P0 C17 5.057 -2.406 0.507 ETKDGv3 24
9P0 C18 5.813 -2.165 1.589 ETKDGv3 25
9P0 C23 8.570 0.079 0.174 ETKDGv3 26
9P0 O24 8.914 0.619 -1.062 ETKDGv3 27
9P0 O25 9.288 0.329 1.179 ETKDGv3 28
9P0 C26 0.028 -3.181 0.915 ETKDGv3 29
9P0 O27 -0.802 -3.798 1.638 ETKDGv3 30
9P0 C29 -1.725 -1.583 0.199 ETKDGv3 31
9P0 N32 -3.306 -0.068 -0.980 ETKDGv3 32
9P0 O34 -3.685 0.595 1.240 ETKDGv3 33
9P0 C37 -5.786 2.265 -0.329 ETKDGv3 34
9P0 C38 -7.064 2.585 0.440 ETKDGv3 35
9P0 C39 -7.276 1.425 1.403 ETKDGv3 36
9P0 N40 -6.457 0.336 0.897 ETKDGv3 37
9P0 C41 -6.618 -1.022 1.355 ETKDGv3 38
9P0 O42 -7.354 -1.261 2.351 ETKDGv3 39
9P0 C43 -5.902 -2.163 0.698 ETKDGv3 40
9P0 C44 -1.036 0.740 -0.518 ETKDGv3 41
9P0 O45 -1.106 1.291 0.614 ETKDGv3 42
9P0 N46 -0.118 1.235 -1.505 ETKDGv3 43
9P0 H1 -0.479 3.298 -3.262 ETKDGv3 44
9P0 H2 1.207 3.947 -3.447 ETKDGv3 45
9P0 H3 -0.208 5.035 -3.604 ETKDGv3 46
9P0 H4 -1.002 5.562 -0.358 ETKDGv3 47
9P0 H5 0.690 6.180 -0.539 ETKDGv3 48
9P0 H6 -0.499 6.396 -1.870 ETKDGv3 49
9P0 H7 2.940 1.743 -0.038 ETKDGv3 50
9P0 H8 1.464 1.200 0.826 ETKDGv3 51
9P0 H9 3.243 -0.766 1.448 ETKDGv3 52
9P0 H10 1.491 -1.020 1.481 ETKDGv3 53
9P0 H11 0.815 -5.693 0.870 ETKDGv3 54
9P0 H12 3.151 -6.611 0.662 ETKDGv3 55
9P0 H13 5.040 -5.130 0.465 ETKDGv3 56
9P0 H14 7.599 -1.131 2.376 ETKDGv3 57
9P0 H15 6.808 -0.653 -1.864 ETKDGv3 58
9P0 H16 4.855 -2.042 -1.682 ETKDGv3 59
9P0 H17 -1.563 -0.875 -1.806 ETKDGv3 60
9P0 H18 -5.930 0.256 -1.135 ETKDGv3 61
9P0 H19 1.705 2.101 -2.096 ETKDGv3 62
9P0 H20 5.544 -2.582 2.553 ETKDGv3 63
9P0 H21 9.732 1.209 -1.162 ETKDGv3 64
9P0 H22 -2.427 -2.408 -0.052 ETKDGv3 65
9P0 H23 -1.952 -1.226 1.226 ETKDGv3 66
9P0 H24 -3.727 -0.160 -1.933 ETKDGv3 67
9P0 H25 -5.874 2.568 -1.395 ETKDGv3 68
9P0 H26 -4.942 2.828 0.131 ETKDGv3 69
9P0 H27 -6.980 3.551 0.984 ETKDGv3 70
9P0 H28 -7.918 2.641 -0.270 ETKDGv3 71
9P0 H29 -6.939 1.697 2.427 ETKDGv3 72
9P0 H30 -8.348 1.132 1.423 ETKDGv3 73
9P0 H31 -6.378 -3.127 0.977 ETKDGv3 74
9P0 H32 -5.942 -2.063 -0.406 ETKDGv3 75
9P0 H33 -4.844 -2.181 1.032 ETKDGv3 76
9P0 H34 -0.231 0.914 -2.493 ETKDGv3 77
#