Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Chemical Bonds

 Molecule : 8ZL    

Bonds between two atoms of the molecule

Total Number of Bonds: 76


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C14 C15 C C doub 1.38 N Y
2 C14 C13 C C sing 1.4 N Y
3 C15 C16 C C sing 1.38 N Y
4 O4 C12 O C doub 1.21 N N
5 C12 C13 C C sing 1.48 N N
6 C12 O3 C O sing 1.35 N N
7 C13 C18 C C doub 1.4 N Y
8 C16 C17 C C doub 1.38 N Y
9 O3 C11 O C sing 1.46 N N
10 C11 C10 C C sing 1.53 N N
11 C17 C18 C C sing 1.38 N Y
12 C18 C19 C C sing 1.51 N N
13 O5 C22 O C doub 1.21 N N
14 C10 C22 C C sing 1.51 N N
15 C10 N2 C N sing 1.46 N N
16 C19 S C S sing 1.81 N N
17 S C20 S C sing 1.81 N N
18 C22 N3 C N sing 1.37 N N
19 N2 C9 N C sing 1.35 N N
20 N3 C21 N C sing 1.48 N N
21 C20 C21 C C sing 1.53 N N
22 C21 C23 C C sing 1.51 N N
23 C9 O2 C O doub 1.21 N N
24 C9 C8 C C sing 1.51 N N
25 C8 C7 C C sing 1.54 N N
26 C8 N1 C N sing 1.47 N N
27 C24 N4 C N sing 1.47 N N
28 C7 C6 C C sing 1.55 N N
29 C23 N4 C N sing 1.35 N N
30 C23 O6 C O doub 1.21 N N
31 N4 C25 N C sing 1.47 N N
32 O C1 O C doub 1.21 N N
33 O1 C4 O C doub 1.21 N N
34 N1 C4 N C sing 1.35 N N
35 N1 C5 N C sing 1.47 N N
36 C6 C5 C C sing 1.55 N N
37 C4 C3 C C sing 1.51 N N
38 C1 C2 C C sing 1.51 N N
39 C1 N C N sing 1.35 N N
40 C2 C3 C C sing 1.53 N N
41 C N C N sing 1.47 N N
42 C7 H1 C H sing 1.09 N N
43 C7 H2 C H sing 1.09 N N
44 C8 H3 C H sing 1.09 N N
45 N2 H4 N H sing 0.97 N N
46 C5 H5 C H sing 1.09 N N
47 C5 H6 C H sing 1.09 N N
48 C6 H7 C H sing 1.09 N N
49 C6 H8 C H sing 1.09 N N
50 N3 H9 N H sing 0.97 N N
51 C3 H10 C H sing 1.09 N N
52 C3 H11 C H sing 1.09 N N
53 C2 H12 C H sing 1.09 N N
54 C2 H13 C H sing 1.09 N N
55 C25 H14 C H sing 1.09 N N
56 C25 H15 C H sing 1.09 N N
57 C25 H16 C H sing 1.09 N N
58 C24 H17 C H sing 1.09 N N
59 C24 H18 C H sing 1.09 N N
60 C24 H19 C H sing 1.09 N N
61 C21 H20 C H sing 1.09 N N
62 C20 H21 C H sing 1.09 N N
63 C20 H22 C H sing 1.09 N N
64 C19 H23 C H sing 1.09 N N
65 C19 H24 C H sing 1.09 N N
66 C17 H25 C H sing 1.08 N N
67 C16 H26 C H sing 1.08 N N
68 C15 H27 C H sing 1.08 N N
69 C14 H28 C H sing 1.08 N N
70 C11 H29 C H sing 1.09 N N
71 C11 H30 C H sing 1.09 N N
72 C10 H31 C H sing 1.09 N N
73 N H32 N H sing 0.97 N N
74 C H33 C H sing 1.09 N N
75 C H34 C H sing 1.09 N N
76 C H35 C H sing 1.09 N N