Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 8ZL

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 74


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 N1 N N1 N N N 0 3.685 1.892 0.336
2 C7 C C1 N N N 0 2.496 3.84 1.162
3 C8 C C2 S N N 0 2.529 2.297 1.15
4 N2 N N2 N N N 0 0.071 2.027 1.115
5 C9 C C3 N N N 0 1.26 1.762 0.539
6 O1 O O1 N N N 0 3.442 -0.301 0.568
7 C1 C C4 N N N 0 6.717 -1.429 -1.716
8 O5 O O2 N N N 0 -2.148 -0.107 1.946
9 C5 C C5 N N N 0 4.355 3.103 -0.17
10 C6 C C6 N N N 0 3.961 4.221 0.828
11 N3 N N3 N N N 0 -0.762 -0.93 0.388
12 C4 C C7 N N N 0 4.071 0.623 0.098
13 O4 O O3 N N N 0 -2.688 0.139 -0.372
14 C3 C C8 N N N 0 5.285 0.352 -0.753
15 O3 O O4 N N N 0 -3.447 2.189 -0.007
16 C2 C C9 N N N 0 5.503 -1.158 -0.865
17 N4 N N4 N N N 0 -0.649 -1.765 3.334
18 O6 O O5 N N N 0 -2.667 -2.38 2.65
19 C23 C C10 N N N 0 -1.511 -2.144 2.37
20 C25 C C11 N N N 0 -1.108 -1.639 4.72
21 C24 C C12 N N N 0 0.748 -1.48 2.997
22 C21 C C13 S N N 0 -1.038 -2.275 0.945
23 C20 C C14 N N N 0 -2.128 -2.939 0.102
24 S S S1 N N N 0 -3.522 -1.796 -0.098
25 C19 C C15 N N N 0 -3.628 -1.594 -1.898
26 C18 C C16 N Y N 0 -4.647 -0.533 -2.226
27 C17 C C17 N Y N 0 -5.64 -0.79 -3.148
28 C16 C C18 N Y N 0 -6.577 0.183 -3.449
29 C15 C C19 N Y N 0 -6.526 1.417 -2.826
30 C14 C C20 N Y N 0 -5.537 1.689 -1.904
31 C13 C C21 N Y N 0 -4.585 0.713 -1.599
32 C12 C C22 N N N 0 -3.514 0.994 -0.622
33 C11 C C23 N N N 0 -2.34 2.397 0.929
34 C22 C C24 N N N 0 -1.402 0.103 1.013
35 C10 C C25 R N N 0 -1.163 1.507 0.521
36 O2 O O6 N N N 0 1.308 1.093 -0.472
37 O O O7 N N N 0 7.346 -0.505 -2.187
38 N N N5 N N N 0 7.103 -2.698 -1.955
39 C C C26 N N N 0 8.284 -2.961 -2.782
40 H1 H H1 N N N 0 1.816 4.218 0.399
41 H2 H H2 N N N 0 2.215 4.214 2.146
42 H3 H H3 N N N 0 2.641 1.92 2.166
43 H4 H H4 N N N 0 0.032 2.562 1.923
44 H5 H H5 N N N 0 5.436 2.964 -0.177
45 H6 H H6 N N N 0 3.997 3.344 -1.172
46 H7 H H7 N N N 0 4.012 5.201 0.355
47 H8 H H8 N N N 0 4.587 4.186 1.72
48 H9 H H9 N N N 0 -0.166 -0.793 -0.364
49 H10 H H10 N N N 0 5.133 0.772 -1.747
50 H11 H H11 N N N 0 6.161 0.812 -0.294
51 H12 H H12 N N N 0 4.628 -1.618 -1.324
52 H13 H H13 N N N 0 5.655 -1.578 0.129
53 H14 H H14 N N N 0 -0.98 -2.591 5.234
54 H15 H H15 N N N 0 -0.524 -0.871 5.227
55 H16 H H16 N N N 0 -2.162 -1.359 4.729
56 H17 H H17 N N N 0 1.337 -2.394 3.084
57 H18 H H18 N N N 0 0.806 -1.107 1.975
58 H19 H H19 N N N 0 1.141 -0.729 3.682
59 H20 H H20 N N N 0 -0.13 -2.877 0.915
60 H21 H H21 N N N 0 -1.724 -3.194 -0.878
61 H22 H H22 N N N 0 -2.471 -3.846 0.6
62 H23 H H23 N N N 0 -2.655 -1.296 -2.288
63 H24 H H24 N N N 0 -3.928 -2.538 -2.352
64 H25 H H25 N N N 0 -5.687 -1.752 -3.637
65 H26 H H26 N N N 0 -7.352 -0.023 -4.173
66 H27 H H27 N N N 0 -7.263 2.17 -3.063
67 H28 H H28 N N N 0 -5.498 2.653 -1.419
68 H29 H H29 N N N 0 -2.033 3.442 0.902
69 H30 H H30 N N N 0 -2.663 2.138 1.937
70 H31 H H31 N N N 0 -1.071 1.503 -0.565
71 H32 H H32 N N N 0 6.6 -3.437 -1.579
72 H33 H H33 N N N 0 8.439 -4.037 -2.862
73 H34 H H34 N N N 0 8.131 -2.541 -3.776
74 H35 H H35 N N N 0 9.159 -2.501 -2.323