Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 8M6    

Bonds between two atoms of the molecule

Total Number of Bonds: 62


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C21 C22 C C doub 1.38 N Y
2 C21 N5 C N sing 1.32 N Y
3 C22 C23 C C sing 1.39 N Y
4 N5 C20 N C doub 1.32 N Y
5 O3 C18 O C doub 1.21 N N
6 C23 C19 C C doub 1.39 N Y
7 C20 C19 C C sing 1.39 N Y
8 C20 C24 C C sing 1.51 N N
9 C19 N4 C N sing 1.4 N N
10 C18 N4 C N sing 1.35 N N
11 C18 C17 C C sing 1.51 N N
12 C15 C16 C C sing 1.41 N Y
13 C15 C14 C C doub 1.35 N Y
14 C16 C13 C C doub 1.34 N Y
15 S2 C17 S C sing 1.81 N N
16 S2 C1 S C sing 1.76 N N
17 C14 O2 C O sing 1.34 N Y
18 C13 O2 C O sing 1.34 N Y
19 C13 C12 C C sing 1.51 N N
20 C1 N1 C N doub 1.32 N N
21 C1 N2 C N sing 1.36 N N
22 N1 C2 N C sing 1.35 N N
23 C12 N2 C N sing 1.47 N N
24 N2 C4 N C sing 1.36 N N
25 C2 S1 C S sing 1.75 N Y
26 C2 C3 C C doub 1.4 N Y
27 S1 C5 S C sing 1.76 N Y
28 C4 C3 C C sing 1.43 N N
29 C4 O4 C O doub 1.22 N N
30 C3 C6 C C sing 1.45 N Y
31 C5 C6 C C doub 1.34 N Y
32 C5 C7 C C sing 1.52 N N
33 C6 C9 C C sing 1.52 N N
34 C7 N3 C N sing 1.47 N N
35 C9 C8 C C sing 1.53 N N
36 O1 C10 O C doub 1.21 N N
37 N3 C10 N C sing 1.35 N N
38 N3 C8 N C sing 1.47 N N
39 C10 C11 C C sing 1.51 N N
40 C7 H1 C H sing 1.09 N N
41 C7 H2 C H sing 1.09 N N
42 C8 H3 C H sing 1.09 N N
43 C8 H4 C H sing 1.09 N N
44 C15 H5 C H sing 1.08 N N
45 C17 H6 C H sing 1.09 N N
46 C17 H7 C H sing 1.09 N N
47 C21 H8 C H sing 1.08 N N
48 C22 H9 C H sing 1.08 N N
49 C24 H10 C H sing 1.09 N N
50 C24 H11 C H sing 1.09 N N
51 C24 H12 C H sing 1.09 N N
52 C9 H13 C H sing 1.09 N N
53 C9 H14 C H sing 1.09 N N
54 C11 H15 C H sing 1.09 N N
55 C11 H16 C H sing 1.09 N N
56 C11 H17 C H sing 1.09 N N
57 C12 H18 C H sing 1.09 N N
58 C12 H19 C H sing 1.09 N N
59 C14 H20 C H sing 1.08 N N
60 C16 H21 C H sing 1.08 N N
61 N4 H22 N H sing 0.97 N N
62 C23 H23 C H sing 1.08 N N