Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 6XL    

Bonds between two atoms of the molecule

Total Number of Bonds: 69


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 N35 C34 N C doub 1.33 N Y
2 N35 C36 N C sing 1.32 N Y
3 C34 C33 C C sing 1.38 N Y
4 C36 N37 C N doub 1.32 N Y
5 C33 C32 C C doub 1.4 N Y
6 N37 C32 N C sing 1.33 N Y
7 C32 N31 C N sing 1.39 N N
8 N31 C25 N C sing 1.4 N N
9 C25 C24 C C doub 1.37 N N
10 C25 C26 C C sing 1.41 N N
11 C24 C23 C C sing 1.41 N N
12 O27 C26 O C doub 1.22 N N
13 C26 N28 C N sing 1.35 N N
14 C20 C21 C C doub 1.38 N Y
15 C20 C19 C C sing 1.4 N Y
16 C21 N22 C N sing 1.32 N Y
17 C23 C19 C C sing 1.48 N N
18 C23 C29 C C doub 1.36 N N
19 N28 C29 N C sing 1.36 N N
20 N28 C30 N C sing 1.46 N N
21 C19 C18 C C doub 1.39 N Y
22 N22 C17 N C doub 1.32 N Y
23 C18 C17 C C sing 1.39 N Y
24 C18 C38 C C sing 1.51 N N
25 C17 N10 C N sing 1.39 N N
26 C38 O39 C O sing 1.43 N N
27 N10 N9 N N sing 1.39 N N
28 N10 C11 N C sing 1.35 N N
29 N9 C8 N C doub 1.3 N N
30 O12 C11 O C doub 1.22 N N
31 C11 C13 C C sing 1.47 N N
32 C8 C7 C C sing 1.46 N N
33 C13 C7 C C doub 1.41 N Y
34 C13 C14 C C sing 1.4 N Y
35 C7 C6 C C sing 1.4 N Y
36 F16 C14 F C sing 1.35 N N
37 C14 C15 C C doub 1.38 N Y
38 C6 C5 C C doub 1.38 N Y
39 C15 C5 C C sing 1.39 N Y
40 C5 C2 C C sing 1.51 N N
41 C3 C2 C C sing 1.53 N N
42 C2 C1 C C sing 1.53 N N
43 C2 C4 C C sing 1.53 N N
44 C4 H1 C H sing 1.09 N N
45 C4 H2 C H sing 1.09 N N
46 C4 H3 C H sing 1.09 N N
47 C6 H4 C H sing 1.08 N N
48 C8 H5 C H sing 1.08 N N
49 C3 H6 C H sing 1.09 N N
50 C3 H7 C H sing 1.09 N N
51 C3 H8 C H sing 1.09 N N
52 C1 H9 C H sing 1.09 N N
53 C1 H10 C H sing 1.09 N N
54 C1 H11 C H sing 1.09 N N
55 C15 H12 C H sing 1.08 N N
56 C20 H13 C H sing 1.08 N N
57 C21 H14 C H sing 1.08 N N
58 C24 H15 C H sing 1.08 N N
59 C29 H16 C H sing 1.08 N N
60 C30 H17 C H sing 1.09 N N
61 C30 H18 C H sing 1.09 N N
62 C30 H19 C H sing 1.09 N N
63 N31 H20 N H sing 0.97 N N
64 C33 H21 C H sing 1.08 N N
65 C34 H22 C H sing 1.08 N N
66 C36 H23 C H sing 1.08 N N
67 C38 H24 C H sing 1.09 N N
68 C38 H25 C H sing 1.09 N N
69 O39 H26 O H sing 0.97 N N