Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Atoms of Molecule

 Molecule : 6XL

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 65


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C4 C C1 N N N 0 8.295 -1.736 -1.556
2 C14 C C2 N Y N 0 4.907 0.534 -1.254
3 C5 C C3 N Y N 0 6.258 -1.187 -0.252
4 C6 C C4 N Y N 0 5.378 -1.305 0.801
5 C11 C C5 N N N 0 2.797 1.262 -0.12
6 C7 C C6 N Y N 0 4.24 -0.499 0.844
7 C8 C C7 N N N 0 3.273 -0.586 1.939
8 C1 C C10 N N N 0 8.346 -1.792 0.942
9 C13 C C8 N Y N 0 4.002 0.43 -0.196
10 C3 C C9 N N N 0 7.069 -3.529 -0.321
11 C2 C C11 N N N 0 7.487 -2.057 -0.297
12 N9 N N1 N N N 0 2.224 0.182 1.942
13 N10 N N2 N N N 0 1.966 1.109 0.932
14 O12 O O1 N N N 0 2.55 2.077 -0.992
15 C15 C C12 N Y N 0 6.026 -0.275 -1.273
16 F16 F F1 N N N 0 4.687 1.414 -2.254
17 C17 C C13 N Y N 0 0.817 1.896 1.01
18 C18 C C14 N Y N 0 -0.39 1.399 0.539
19 C19 C C15 N Y N 0 -1.53 2.198 0.624
20 C20 C C16 N Y N 0 -1.405 3.474 1.186
21 C21 C C17 N Y N 0 -0.169 3.893 1.631
22 N22 N N3 N Y N 0 0.888 3.108 1.539
23 C23 C C18 N N N 0 -2.842 1.709 0.133
24 C24 C C19 N N N 0 -3.57 0.759 0.883
25 C25 C C20 N N N 0 -4.775 0.322 0.411
26 C26 C C21 N N N 0 -5.264 0.831 -0.813
27 O27 O O2 N N N 0 -6.339 0.448 -1.245
28 N28 N N4 N N N 0 -4.547 1.736 -1.505
29 C29 C C22 N N N 0 -3.351 2.179 -1.042
30 C30 C C23 N N N 0 -5.067 2.253 -2.773
31 N31 N N5 N N N 0 -5.518 -0.62 1.134
32 C32 C C24 N Y N 0 -5.821 -1.847 0.566
33 C33 C C25 N Y N 0 -5.288 -2.205 -0.674
34 C34 C C26 N Y N 0 -5.62 -3.439 -1.198
35 N35 N N6 N Y N 0 -6.427 -4.237 -0.513
36 O39 O O3 N N N 0 -0.772 -0.929 0.97
37 C36 C C27 N Y N 0 -6.914 -3.87 0.656
38 N37 N N7 N Y N 0 -6.619 -2.704 1.196
39 C38 C C28 N N N 0 -0.467 0.016 -0.057
40 H1 H H1 N N N 0 8.592 -0.688 -1.538
41 H2 H H2 N N N 0 9.184 -2.366 -1.588
42 H3 H H3 N N N 0 7.683 -1.925 -2.438
43 H4 H H4 N N N 0 5.568 -2.018 1.59
44 H5 H H5 N N N 0 3.431 -1.288 2.744
45 H6 H H6 N N N 0 6.457 -3.718 -1.203
46 H7 H H7 N N N 0 7.958 -4.159 -0.353
47 H8 H H8 N N N 0 6.494 -3.758 0.576
48 H9 H H9 N N N 0 7.771 -2.021 1.839
49 H10 H H10 N N N 0 9.235 -2.422 0.909
50 H11 H H11 N N N 0 8.644 -0.743 0.959
51 H12 H H12 N N N 0 6.728 -0.198 -2.09
52 H13 H H13 N N N 0 -2.264 4.124 1.266
53 H14 H H14 N N N 0 -0.065 4.877 2.065
54 H15 H H15 N N N 0 -3.179 0.382 1.817
55 H16 H H16 N N N 0 -2.795 2.909 -1.612
56 H17 H H17 N N N 0 -6.032 1.792 -2.984
57 H18 H H18 N N N 0 -5.188 3.334 -2.702
58 H19 H H19 N N N 0 -4.369 2.017 -3.576
59 H20 H H20 N N N 0 -5.821 -0.413 2.032
60 H21 H H21 N N N 0 -4.634 -1.534 -1.21
61 H22 H H22 N N N 0 -5.228 -3.75 -2.155
62 H23 H H23 N N N 0 -7.568 -4.544 1.188
63 H24 H H24 N N N 0 -1.247 -0.008 -0.818
64 H25 H H25 N N N 0 0.491 -0.237 -0.512
65 H26 H H26 N N N 0 -0.837 -1.842 0.658