data_6XL
#
_chem_comp.id 6XL
_chem_comp.name
6-~{tert}-butyl-8-fluoranyl-2-[3-(hydroxymethyl)-4-[1-methyl-6-oxidanylidene-5-(pyrimidin-4-ylamino)pyridin-3-yl]pyridin-2-yl]phthalazin-1-one
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C28 H26 F N7 O3"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2016-07-14
_chem_comp.pdbx_modified_date 2016-09-09
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 527.550
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 6XL
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 5KUP
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
6XL C4 C1 C 0 1 N N N N N N -42.091 27.158 0.855 8.295 -1.736 -1.556 C4 6XL 1
6XL C14 C2 C 0 1 Y N N N N N -41.243 28.623 -2.954 4.907 0.534 -1.254 C14 6XL 2
6XL C5 C3 C 0 1 Y N N N N N -41.768 26.725 -1.577 6.258 -1.187 -0.252 C5 6XL 3
6XL C6 C4 C 0 1 Y N N N N N -41.798 25.930 -2.701 5.378 -1.305 0.801 C6 6XL 4
6XL C11 C5 C 0 1 N N N N N N -40.985 28.331 -5.465 2.797 1.262 -0.120 C11 6XL 5
6XL C7 C6 C 0 1 Y N N N N N -41.556 26.469 -3.971 4.240 -0.499 0.844 C7 6XL 6
6XL C8 C7 C 0 1 N N N N N N -41.563 25.608 -5.140 3.273 -0.586 1.939 C8 6XL 7
6XL C13 C8 C 0 1 Y N N N N N -41.297 27.844 -4.115 4.002 0.430 -0.196 C13 6XL 8
6XL C3 C9 C 0 1 N N N N N N -43.380 25.336 -0.246 7.069 -3.529 -0.321 C3 6XL 9
6XL C1 C10 C 0 1 N N N N N N -40.921 25.091 0.071 8.346 -1.792 0.942 C1 6XL 10
6XL C2 C11 C 0 1 N N N N N N -42.045 26.090 -0.234 7.487 -2.057 -0.297 C2 6XL 11
6XL N9 N1 N 0 1 N N N N N N -41.242 26.080 -6.294 2.224 0.182 1.942 N9 6XL 12
6XL N10 N2 N 0 1 N N N N N N -40.930 27.424 -6.466 1.966 1.109 0.932 N10 6XL 13
6XL O12 O1 O 0 1 N N N N N N -40.715 29.521 -5.669 2.550 2.077 -0.992 O12 6XL 14
6XL C15 C12 C 0 1 Y N N N N N -41.497 28.083 -1.702 6.026 -0.275 -1.273 C15 6XL 15
6XL F16 F1 F 0 1 N N N N N N -40.957 29.938 -3.041 4.687 1.414 -2.254 F16 6XL 16
6XL C17 C13 C 0 1 Y N N N N N -40.560 27.789 -7.762 0.817 1.896 1.010 C17 6XL 17
6XL C18 C14 C 0 1 Y N N N N N -39.193 27.788 -8.039 -0.390 1.399 0.539 C18 6XL 18
6XL C19 C15 C 0 1 Y N N N N N -38.766 28.138 -9.328 -1.530 2.198 0.624 C19 6XL 19
6XL C20 C16 C 0 1 Y N N N N N -39.772 28.481 -10.242 -1.405 3.474 1.186 C20 6XL 20
6XL C21 C17 C 0 1 Y N N N N N -41.109 28.450 -9.877 -0.169 3.893 1.631 C21 6XL 21
6XL N22 N3 N 0 1 Y N N N N N -41.468 28.100 -8.658 0.888 3.108 1.539 N22 6XL 22
6XL C23 C18 C 0 1 N N N N N N -37.342 28.217 -9.777 -2.842 1.709 0.133 C23 6XL 23
6XL C24 C19 C 0 1 N N N N N N -36.911 27.700 -11.021 -3.570 0.759 0.883 C24 6XL 24
6XL C25 C20 C 0 1 N N N N N N -35.588 27.850 -11.398 -4.775 0.322 0.411 C25 6XL 25
6XL C26 C21 C 0 1 N N N N N N -34.673 28.510 -10.550 -5.264 0.831 -0.813 C26 6XL 26
6XL O27 O2 O 0 1 N N N N N N -33.499 28.643 -10.890 -6.339 0.448 -1.245 O27 6XL 27
6XL N28 N4 N 0 1 N N N N N N -35.102 28.985 -9.378 -4.547 1.736 -1.505 N28 6XL 28
6XL C29 C22 C 0 1 N N N N N N -36.401 28.855 -9.004 -3.351 2.179 -1.042 C29 6XL 29
6XL C30 C23 C 0 1 N N N N N N -34.130 29.643 -8.495 -5.067 2.253 -2.773 C30 6XL 30
6XL N31 N5 N 0 1 N N N N N N -35.019 27.371 -12.597 -5.518 -0.620 1.134 N31 6XL 31
6XL C32 C24 C 0 1 Y N N N N N -35.683 26.956 -13.735 -5.821 -1.847 0.566 C32 6XL 32
6XL C33 C25 C 0 1 Y N N N N N -34.911 26.649 -14.853 -5.288 -2.205 -0.674 C33 6XL 33
6XL C34 C26 C 0 1 Y N N N N N -35.563 26.228 -15.991 -5.620 -3.439 -1.198 C34 6XL 34
6XL N35 N6 N 0 1 Y N N N N N -36.891 26.147 -15.991 -6.427 -4.237 -0.513 N35 6XL 35
6XL C36 C27 C 0 1 Y N N N N N -37.589 26.449 -14.918 -6.914 -3.870 0.656 C36 6XL 36
6XL N37 N7 N 0 1 Y N N N N N -37.003 26.841 -13.802 -6.619 -2.704 1.196 N37 6XL 37
6XL C38 C28 C 0 1 N N N N N N -38.215 27.331 -6.983 -0.467 0.016 -0.057 C38 6XL 38
6XL O39 O3 O 0 1 N N N N N N -37.785 28.351 -6.098 -0.772 -0.929 0.970 O39 6XL 39
6XL H1 H1 H 0 1 N N N N N N -42.293 26.683 1.827 8.592 -0.688 -1.538 H1 6XL 40
6XL H2 H2 H 0 1 N N N N N N -41.124 27.681 0.897 9.184 -2.366 -1.588 H2 6XL 41
6XL H3 H3 H 0 1 N N N N N N -42.889 27.880 0.627 7.683 -1.925 -2.438 H3 6XL 42
6XL H4 H4 H 0 1 N N N N N N -42.011 24.876 -2.602 5.568 -2.018 1.590 H4 6XL 43
6XL H5 H5 H 0 1 N N N N N N -41.838 24.568 -5.041 3.431 -1.288 2.744 H5 6XL 44
6XL H6 H6 H 0 1 N N N N N N -43.556 24.885 0.742 6.457 -3.718 -1.203 H6 6XL 45
6XL H7 H7 H 0 1 N N N N N N -44.195 26.037 -0.479 7.958 -4.159 -0.353 H7 6XL 46
6XL H8 H8 H 0 1 N N N N N N -43.347 24.545 -1.010 6.494 -3.758 0.576 H8 6XL 47
6XL H9 H9 H 0 1 N N N N N N -41.105 24.618 1.047 7.771 -2.021 1.839 H9 6XL 48
6XL H10 H10 H 0 1 N N N N N N -40.894 24.319 -0.712 9.235 -2.422 0.909 H10 6XL 49
6XL H11 H11 H 0 1 N N N N N N -39.957 25.620 0.097 8.644 -0.743 0.959 H11 6XL 50
6XL H12 H12 H 0 1 N N N N N N -41.484 28.716 -0.827 6.728 -0.198 -2.090 H12 6XL 51
6XL H13 H13 H 0 1 N N N N N N -39.501 28.774 -11.246 -2.264 4.124 1.266 H13 6XL 52
6XL H14 H14 H 0 1 N N N N N N -41.866 28.716 -10.600 -0.065 4.877 2.065 H14 6XL 53
6XL H15 H15 H 0 1 N N N N N N -37.608 27.193 -11.671 -3.179 0.382 1.817 H15 6XL 54
6XL H16 H16 H 0 1 N N N N N N -36.709 29.272 -8.056 -2.795 2.909 -1.612 H16 6XL 55
6XL H17 H17 H 0 1 N N N N N N -34.635 29.976 -7.576 -6.032 1.792 -2.984 H17 6XL 56
6XL H18 H18 H 0 1 N N N N N N -33.330 28.933 -8.237 -5.188 3.334 -2.702 H18 6XL 57
6XL H19 H19 H 0 1 N N N N N N -33.696 30.512 -9.011 -4.369 2.017 -3.576 H19 6XL 58
6XL H20 H20 H 0 1 N N N N N N -34.020 27.327 -12.626 -5.821 -0.413 2.032 H20 6XL 59
6XL H21 H21 H 0 1 N N N N N N -33.835 26.738 -14.828 -4.634 -1.534 -1.210 H21 6XL 60
6XL H22 H22 H 0 1 N N N N N N -35.001 25.966 -16.875 -5.228 -3.750 -2.155 H22 6XL 61
6XL H23 H23 H 0 1 N N N N N N -38.666 26.375 -14.951 -7.568 -4.544 1.188 H23 6XL 62
6XL H24 H24 H 0 1 N N N N N N -38.696 26.541 -6.388 -1.247 -0.008 -0.818 H24 6XL 63
6XL H25 H25 H 0 1 N N N N N N -37.329 26.920 -7.490 0.491 -0.237 -0.512 H25 6XL 64
6XL H26 H26 H 0 1 N N N N N N -37.175 27.987 -5.467 -0.837 -1.842 0.658 H26 6XL 65
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
6XL N35 C34 DOUB Y N 1
6XL N35 C36 SING Y N 2
6XL C34 C33 SING Y N 3
6XL C36 N37 DOUB Y N 4
6XL C33 C32 DOUB Y N 5
6XL N37 C32 SING Y N 6
6XL C32 N31 SING N N 7
6XL N31 C25 SING N N 8
6XL C25 C24 DOUB N N 9
6XL C25 C26 SING N N 10
6XL C24 C23 SING N N 11
6XL O27 C26 DOUB N N 12
6XL C26 N28 SING N N 13
6XL C20 C21 DOUB Y N 14
6XL C20 C19 SING Y N 15
6XL C21 N22 SING Y N 16
6XL C23 C19 SING N N 17
6XL C23 C29 DOUB N N 18
6XL N28 C29 SING N N 19
6XL N28 C30 SING N N 20
6XL C19 C18 DOUB Y N 21
6XL N22 C17 DOUB Y N 22
6XL C18 C17 SING Y N 23
6XL C18 C38 SING N N 24
6XL C17 N10 SING N N 25
6XL C38 O39 SING N N 26
6XL N10 N9 SING N N 27
6XL N10 C11 SING N N 28
6XL N9 C8 DOUB N N 29
6XL O12 C11 DOUB N N 30
6XL C11 C13 SING N N 31
6XL C8 C7 SING N N 32
6XL C13 C7 DOUB Y N 33
6XL C13 C14 SING Y N 34
6XL C7 C6 SING Y N 35
6XL F16 C14 SING N N 36
6XL C14 C15 DOUB Y N 37
6XL C6 C5 DOUB Y N 38
6XL C15 C5 SING Y N 39
6XL C5 C2 SING N N 40
6XL C3 C2 SING N N 41
6XL C2 C1 SING N N 42
6XL C2 C4 SING N N 43
6XL C4 H1 SING N N 44
6XL C4 H2 SING N N 45
6XL C4 H3 SING N N 46
6XL C6 H4 SING N N 47
6XL C8 H5 SING N N 48
6XL C3 H6 SING N N 49
6XL C3 H7 SING N N 50
6XL C3 H8 SING N N 51
6XL C1 H9 SING N N 52
6XL C1 H10 SING N N 53
6XL C1 H11 SING N N 54
6XL C15 H12 SING N N 55
6XL C20 H13 SING N N 56
6XL C21 H14 SING N N 57
6XL C24 H15 SING N N 58
6XL C29 H16 SING N N 59
6XL C30 H17 SING N N 60
6XL C30 H18 SING N N 61
6XL C30 H19 SING N N 62
6XL N31 H20 SING N N 63
6XL C33 H21 SING N N 64
6XL C34 H22 SING N N 65
6XL C36 H23 SING N N 66
6XL C38 H24 SING N N 67
6XL C38 H25 SING N N 68
6XL O39 H26 SING N N 69
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
6XL InChI InChI 1.03 InChI=1S/C28H26FN7O3/c1-28(2,3)18-9-16-12-33-36(27(39)24(16)21(29)11-18)25-20(14-37)19(5-8-31-25)17-10-22(26(38)35(4)13-17)34-23-6-7-30-15-32-23/h5-13,15,37H,14H2,1-4H3,(H,30,32,34)
6XL InChIKey InChI 1.03 QTEIEFCDHKXATA-UHFFFAOYSA-N
6XL SMILES_CANONICAL CACTVS 3.385 CN1C=C(C=C(Nc2ccncn2)C1=O)c3ccnc(N4N=Cc5cc(cc(F)c5C4=O)C(C)(C)C)c3CO
6XL SMILES CACTVS 3.385 CN1C=C(C=C(Nc2ccncn2)C1=O)c3ccnc(N4N=Cc5cc(cc(F)c5C4=O)C(C)(C)C)c3CO
6XL SMILES_CANONICAL "OpenEye OEToolkits" 2.0.5 CC(C)(C)c1cc2c(c(c1)F)C(=O)N(N=C2)c3c(c(ccn3)C4=CN(C(=O)C(=C4)Nc5ccncn5)C)CO
6XL SMILES "OpenEye OEToolkits" 2.0.5 CC(C)(C)c1cc2c(c(c1)F)C(=O)N(N=C2)c3c(c(ccn3)C4=CN(C(=O)C(=C4)Nc5ccncn5)C)CO
#
_pdbx_chem_comp_identifier.comp_id 6XL
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.5
_pdbx_chem_comp_identifier.identifier
6-~{tert}-butyl-8-fluoranyl-2-[3-(hydroxymethyl)-4-[1-methyl-6-oxidanylidene-5-(pyrimidin-4-ylamino)pyridin-3-yl]pyridin-2-yl]phthalazin-1-one
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
6XL 'Create component' 2016-07-14 RCSB
6XL 'Initial release' 2016-09-14 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
6XL C4 C 5.051 7.791 1
6XL C14 C 6.951 3.407 2
6XL C5 C 5.592 5.740 3
6XL C6 C 6.951 6.511 4
6XL C11 C 9.591 3.459 5
6XL C7 C 8.292 5.709 6
6XL C8 C 9.591 6.459 7
6XL C13 C 8.292 4.209 8
6XL C3 C 3.000 7.250 9
6XL C1 C 3.541 5.199 10
6XL C2 C 4.296 6.495 11
6XL N9 N 10.890 5.709 12
6XL N10 N 10.890 4.209 13
6XL O12 O 9.591 1.959 14
6XL C15 C 5.592 4.178 15
6XL F16 F 6.969 1.907 16
6XL C17 C 12.190 3.459 17
6XL C18 C 12.190 1.959 18
6XL C19 C 13.489 1.209 19
6XL C20 C 14.787 1.959 20
6XL C21 C 14.787 3.459 21
6XL N22 N 13.489 4.209 22
6XL C23 C 13.489 -0.291 23
6XL C24 C 12.190 -1.041 24
6XL C25 C 12.190 -2.541 25
6XL C26 C 13.489 -3.291 26
6XL O27 O 13.489 -4.791 27
6XL N28 N 14.787 -2.541 28
6XL C29 C 14.787 -1.041 29
6XL C30 C 16.086 -3.291 30
6XL N31 N 10.890 -3.291 31
6XL C32 C 10.890 -4.791 32
6XL C33 C 12.190 -5.541 33
6XL C34 C 12.190 -7.041 34
6XL N35 N 10.890 -7.791 35
6XL C36 C 9.591 -7.041 36
6XL N37 N 9.591 -5.541 37
6XL C38 C 10.890 1.209 38
6XL O39 O 10.890 -0.291 39
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
6XL N35 C34 SINGLE NONE 1
6XL N35 C36 DOUBLE NONE 2
6XL C34 C33 DOUBLE NONE 3
6XL C36 N37 SINGLE NONE 4
6XL C33 C32 SINGLE NONE 5
6XL N37 C32 DOUBLE NONE 6
6XL C32 N31 SINGLE NONE 7
6XL N31 C25 SINGLE NONE 8
6XL C25 C24 DOUBLE NONE 9
6XL C25 C26 SINGLE NONE 10
6XL C24 C23 SINGLE NONE 11
6XL O27 C26 DOUBLE NONE 12
6XL C26 N28 SINGLE NONE 13
6XL C20 C21 DOUBLE NONE 14
6XL C20 C19 SINGLE NONE 15
6XL C21 N22 SINGLE NONE 16
6XL C23 C19 SINGLE NONE 17
6XL C23 C29 DOUBLE NONE 18
6XL N28 C29 SINGLE NONE 19
6XL N28 C30 SINGLE NONE 20
6XL C19 C18 DOUBLE NONE 21
6XL N22 C17 DOUBLE NONE 22
6XL C18 C17 SINGLE NONE 23
6XL C18 C38 SINGLE NONE 24
6XL C17 N10 SINGLE NONE 25
6XL C38 O39 SINGLE NONE 26
6XL N10 N9 SINGLE NONE 27
6XL N10 C11 SINGLE NONE 28
6XL N9 C8 DOUBLE NONE 29
6XL O12 C11 DOUBLE NONE 30
6XL C11 C13 SINGLE NONE 31
6XL C8 C7 SINGLE NONE 32
6XL C13 C7 SINGLE NONE 33
6XL C13 C14 DOUBLE NONE 34
6XL C7 C6 DOUBLE NONE 35
6XL F16 C14 SINGLE NONE 36
6XL C14 C15 SINGLE NONE 37
6XL C6 C5 SINGLE NONE 38
6XL C15 C5 DOUBLE NONE 39
6XL C5 C2 SINGLE NONE 40
6XL C3 C2 SINGLE NONE 41
6XL C2 C1 SINGLE NONE 42
6XL C2 C4 SINGLE NONE 43
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
6XL MurckoScaffold S1 scaffold 'O=c1[nH]cc(-c2ccnc(-n3ncc4ccccc4c3=O)c2)cc1Nc1ccncn1' InChI=1S/C22H15N7O2/c30-21-18(28-19-6-7-23-13-26-19)9-16(11-25-21)14-5-8-24-20(10-14)29-22(31)17-4-2-1-3-15(17)12-27-29/h1-13H,(H,25,30)(H,23,26,28) DUYHTTHURZDJRN-UHFFFAOYSA-N
6XL phenyl F1 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
6XL phthalazine F2 fragment c1ccc2cnncc2c1 InChI=1S/C8H6N2/c1-2-4-8-6-10-9-5-7(8)3-1/h1-6H LFSXCDWNBUNEEM-UHFFFAOYSA-N
6XL pyridazine F3 fragment c1ccnnc1 InChI=1S/C4H4N2/c1-2-4-6-5-3-1/h1-4H PBMFSQRYOILNGV-UHFFFAOYSA-N
6XL pyridine F4 fragment c1ccncc1 InChI=1S/C5H5N/c1-2-4-6-5-3-1/h1-5H JUJWROOIHBZHMG-UHFFFAOYSA-N
6XL pyrimidine F5 fragment c1cncnc1 InChI=1S/C4H4N2/c1-2-5-4-6-3-1/h1-4H CZPWVGJYEJSRLH-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
6XL C14 S1 1
6XL C5 S1 1
6XL C6 S1 1
6XL C11 S1 1
6XL C7 S1 1
6XL C8 S1 1
6XL C13 S1 1
6XL N9 S1 1
6XL N10 S1 1
6XL O12 S1 1
6XL C15 S1 1
6XL C17 S1 1
6XL C18 S1 1
6XL C19 S1 1
6XL C20 S1 1
6XL C21 S1 1
6XL N22 S1 1
6XL C23 S1 1
6XL C24 S1 1
6XL C25 S1 1
6XL C26 S1 1
6XL O27 S1 1
6XL N28 S1 1
6XL C29 S1 1
6XL N31 S1 1
6XL C32 S1 1
6XL C33 S1 1
6XL C34 S1 1
6XL N35 S1 1
6XL C36 S1 1
6XL N37 S1 1
6XL C14 F1 1
6XL C13 F1 1
6XL C7 F1 1
6XL C6 F1 1
6XL C5 F1 1
6XL C15 F1 1
6XL C5 F2 1
6XL C6 F2 1
6XL C7 F2 1
6XL C13 F2 1
6XL C14 F2 1
6XL C15 F2 1
6XL C11 F2 1
6XL N10 F2 1
6XL N9 F2 1
6XL C8 F2 1
6XL C7 F3 1
6XL C8 F3 1
6XL N9 F3 1
6XL N10 F3 1
6XL C11 F3 1
6XL C13 F3 1
6XL C17 F4 1
6XL C18 F4 1
6XL C19 F4 1
6XL C20 F4 1
6XL C21 F4 1
6XL N22 F4 1
6XL C26 F4 2
6XL C25 F4 2
6XL C24 F4 2
6XL C23 F4 2
6XL C29 F4 2
6XL N28 F4 2
6XL C33 F5 1
6XL C34 F5 1
6XL N35 F5 1
6XL C36 F5 1
6XL N37 F5 1
6XL C32 F5 1
#
_pdbe_chem_comp_rdkit_properties.comp_id 6XL
_pdbe_chem_comp_rdkit_properties.exactmw 527.208
_pdbe_chem_comp_rdkit_properties.amw 527.560
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 10
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 2
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 7
_pdbe_chem_comp_rdkit_properties.NumHBD 2
_pdbe_chem_comp_rdkit_properties.NumHBA 10
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 39
_pdbe_chem_comp_rdkit_properties.NumAtoms 65
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 11
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.214
_pdbe_chem_comp_rdkit_properties.NumRings 5
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 5
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 4
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 4
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 258.687
_pdbe_chem_comp_rdkit_properties.tpsa 127.820
_pdbe_chem_comp_rdkit_properties.CrippenClogP 3.540
_pdbe_chem_comp_rdkit_properties.CrippenMR 139.554
_pdbe_chem_comp_rdkit_properties.chi0v 18.733
_pdbe_chem_comp_rdkit_properties.chi1v 10.132
_pdbe_chem_comp_rdkit_properties.chi2v 4.886
_pdbe_chem_comp_rdkit_properties.chi3v 4.886
_pdbe_chem_comp_rdkit_properties.chi4v 3.197
_pdbe_chem_comp_rdkit_properties.chi0n 44.733
_pdbe_chem_comp_rdkit_properties.chi1n 22.987
_pdbe_chem_comp_rdkit_properties.chi2n 4.886
_pdbe_chem_comp_rdkit_properties.chi3n 4.886
_pdbe_chem_comp_rdkit_properties.chi4n 3.197
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -4.770
_pdbe_chem_comp_rdkit_properties.kappa1 9.162
_pdbe_chem_comp_rdkit_properties.kappa2 9.839
_pdbe_chem_comp_rdkit_properties.kappa3 4.793
_pdbe_chem_comp_rdkit_properties.Phi 2.312
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
6XL UniChem ZINC ZINC000219947348
6XL UniChem SureChEMBL SCHEMBL14914452
6XL UniChem PubChem 86683933
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
6XL C4 8.874 0.786 -0.162 ETKDGv3 1
6XL C14 5.099 0.087 2.040 ETKDGv3 2
6XL C5 6.519 -0.101 0.030 ETKDGv3 3
6XL C6 5.277 0.130 -0.772 ETKDGv3 4
6XL C11 2.655 0.498 1.893 ETKDGv3 5
6XL C7 4.091 0.314 -0.170 ETKDGv3 6
6XL C8 2.869 0.545 -0.962 ETKDGv3 7
6XL C13 3.992 0.292 1.304 ETKDGv3 8
6XL C3 8.455 -1.700 -0.224 ETKDGv3 9
6XL C1 7.837 -0.268 -2.172 ETKDGv3 10
6XL C2 7.898 -0.317 -0.627 ETKDGv3 11
6XL N9 1.717 0.726 -0.387 ETKDGv3 12
6XL N10 1.534 0.708 1.012 ETKDGv3 13
6XL O12 2.486 0.471 3.143 ETKDGv3 14
6XL C15 6.402 -0.115 1.377 ETKDGv3 15
6XL F16 5.051 0.061 3.397 ETKDGv3 16
6XL C17 0.227 0.983 1.540 ETKDGv3 17
6XL C18 -0.981 0.241 1.056 ETKDGv3 18
6XL C19 -2.194 0.601 1.545 ETKDGv3 19
6XL C20 -2.289 1.670 2.561 ETKDGv3 20
6XL C21 -1.182 2.278 2.988 ETKDGv3 21
6XL N22 0.093 1.914 2.443 ETKDGv3 22
6XL C23 -3.448 -0.043 1.110 ETKDGv3 23
6XL C24 -4.222 0.557 0.000 ETKDGv3 24
6XL C25 -5.368 0.012 -0.429 ETKDGv3 25
6XL C26 -5.835 -1.247 0.194 ETKDGv3 26
6XL O27 -6.818 -1.872 -0.288 ETKDGv3 27
6XL N28 -5.121 -1.772 1.328 ETKDGv3 28
6XL C29 -3.896 -1.141 1.738 ETKDGv3 29
6XL C30 -5.548 -3.016 1.970 ETKDGv3 30
6XL N31 -6.077 0.620 -1.521 ETKDGv3 31
6XL C32 -7.501 0.800 -1.539 ETKDGv3 32
6XL C33 -8.172 1.247 -2.777 ETKDGv3 33
6XL C34 -9.494 1.435 -2.758 ETKDGv3 34
6XL N35 -10.234 1.209 -1.548 ETKDGv3 35
6XL C36 -9.631 0.824 -0.461 ETKDGv3 36
6XL N37 -8.209 0.619 -0.459 ETKDGv3 37
6XL C38 -0.831 -0.876 0.043 ETKDGv3 38
6XL O39 -0.898 -0.363 -1.259 ETKDGv3 39
6XL H1 9.052 0.740 0.933 ETKDGv3 40
6XL H2 8.467 1.791 -0.407 ETKDGv3 41
6XL H3 9.861 0.677 -0.663 ETKDGv3 42
6XL H4 5.312 0.153 -1.852 ETKDGv3 43
6XL H5 2.921 0.571 -2.043 ETKDGv3 44
6XL H6 8.630 -1.767 0.870 ETKDGv3 45
6XL H7 7.744 -2.503 -0.514 ETKDGv3 46
6XL H8 9.427 -1.896 -0.727 ETKDGv3 47
6XL H9 7.474 0.722 -2.523 ETKDGv3 48
6XL H10 8.845 -0.428 -2.612 ETKDGv3 49
6XL H11 7.171 -1.066 -2.567 ETKDGv3 50
6XL H12 7.264 -0.276 2.010 ETKDGv3 51
6XL H13 -3.252 1.955 2.967 ETKDGv3 52
6XL H14 -1.243 3.057 3.737 ETKDGv3 53
6XL H15 -3.851 1.463 -0.465 ETKDGv3 54
6XL H16 -3.322 -1.561 2.557 ETKDGv3 55
6XL H17 -6.655 -3.046 2.055 ETKDGv3 56
6XL H18 -5.127 -3.096 2.995 ETKDGv3 57
6XL H19 -5.202 -3.882 1.367 ETKDGv3 58
6XL H20 -5.520 1.056 -2.291 ETKDGv3 59
6XL H21 -7.606 1.416 -3.685 ETKDGv3 60
6XL H22 -10.011 1.760 -3.652 ETKDGv3 61
6XL H23 -10.201 0.659 0.443 ETKDGv3 62
6XL H24 -1.594 -1.674 0.189 ETKDGv3 63
6XL H25 0.147 -1.381 0.179 ETKDGv3 64
6XL H26 -1.860 -0.235 -1.466 ETKDGv3 65
#