Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 6FN    

Bonds between two atoms of the molecule

Total Number of Bonds: 50


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 N6 C6 N C sing 1.38 N N
2 N1 C6 N C doub 1.33 N Y
3 N1 C2 N C sing 1.32 N Y
4 C6 C5 C C sing 1.41 N Y
5 F32 C2 F C sing 1.35 N N
6 C2 N3 C N doub 1.32 N Y
7 C5 N7 C N sing 1.36 N Y
8 C5 C4 C C doub 1.4 N Y
9 N7 C8 N C doub 1.3 N Y
10 N3 C4 N C sing 1.33 N Y
11 C4 N9 C N sing 1.37 N Y
12 C8 N9 C N sing 1.36 N Y
13 N9 C1' N C sing 1.47 N N
14 O2A PA O P doub 1.48 N N
15 O3G PG O P doub 1.48 N N
16 O3A PA O P sing 1.61 N N
17 O3A PB O P sing 1.61 N N
18 C1' C2' C C sing 1.55 N N
19 C1' O4' C O sing 1.44 N N
20 C2' C3' C C sing 1.55 N N
21 PA O5' P O sing 1.61 N N
22 PA O1A P O sing 1.61 N N
23 O5' C5' O C sing 1.43 N N
24 O3B PG O P sing 1.61 N N
25 O3B PB O P sing 1.61 N N
26 O4' C4' O C sing 1.44 N N
27 PG O1G P O sing 1.61 N N
28 PG O2G P O sing 1.61 N N
29 C3' C4' C C sing 1.54 N N
30 C3' O3' C O sing 1.43 N N
31 PB O1B P O doub 1.48 N N
32 PB O2B P O sing 1.61 N N
33 C4' C5' C C sing 1.53 N N
34 C4' C33 C C sing 1.47 N N
35 C33 C34 C C trip 1.17 N N
36 N6 H1 N H sing 0.97 N N
37 N6 H2 N H sing 0.97 N N
38 C8 H3 C H sing 1.08 N N
39 C1' H4 C H sing 1.09 N N
40 C2' H5 C H sing 1.09 N N
41 C2' H6 C H sing 1.09 N N
42 C3' H7 C H sing 1.09 N N
43 O3' H8 O H sing 0.97 N N
44 C34 H9 C H sing 1.05 N N
45 C5' H10 C H sing 1.09 N N
46 C5' H11 C H sing 1.09 N N
47 O2G H12 O H sing 0.97 N N
48 O1G H13 O H sing 0.97 N N
49 O2B H14 O H sing 0.97 N N
50 O1A H15 O H sing 0.97 N N