data_6FN
#
_chem_comp.id 6FN
_chem_comp.name "2'-deoxy-4'-ethynyl-2-fluoroadenosine 5'-(tetrahydrogen triphosphate)"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C12 H15 F N5 O12 P3"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2016-03-30
_chem_comp.pdbx_modified_date 2016-07-29
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 533.193
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 6FN
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 5J2M
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
6FN C4 C1 C 0 1 Y N N N N N -40.950 -2.810 -27.618 5.309 -0.773 0.091 C4 6FN 1
6FN N3 N1 N 0 1 Y N N N N N -39.649 -2.654 -27.708 6.278 -0.327 0.885 N3 6FN 2
6FN C2 C2 C 0 1 Y N N N N N -39.052 -2.698 -28.899 7.423 -0.975 0.975 C2 6FN 3
6FN F32 F1 F 0 1 N N N N N N -37.698 -2.536 -28.974 8.383 -0.490 1.793 F32 6FN 4
6FN N1 N2 N 0 1 Y N N N N N -39.759 -2.900 -30.022 7.667 -2.083 0.295 N1 6FN 5
6FN C6 C3 C 0 1 Y N N N N N -41.081 -3.064 -29.993 6.756 -2.601 -0.523 C6 6FN 6
6FN N6 N3 N 0 1 N N N N N N -41.842 -3.280 -31.213 7.020 -3.761 -1.231 N6 6FN 7
6FN C5 C4 C 0 1 Y N N N N N -41.706 -3.021 -28.768 5.522 -1.942 -0.657 C5 6FN 8
6FN N7 N4 N 0 1 Y N N N N N -43.058 -3.145 -28.288 4.394 -2.169 -1.373 N7 6FN 9
6FN C8 C5 C 0 1 Y N N N N N -42.958 -2.999 -26.944 3.529 -1.230 -1.127 C8 6FN 10
6FN N9 N5 N 0 1 Y N N N N N -41.767 -2.825 -26.716 4.042 -0.350 -0.220 N9 6FN 11
6FN "C1'" C6 C 0 1 N N R N N N -41.338 -2.633 -25.377 3.370 0.839 0.311 "C1'" 6FN 12
6FN "C2'" C7 C 0 1 N N N N N N -41.145 -1.168 -25.110 3.753 2.095 -0.512 "C2'" 6FN 13
6FN "C3'" C8 C 0 1 N N S N N N -42.354 -0.771 -24.412 2.544 3.029 -0.259 "C3'" 6FN 14
6FN "O3'" O1 O 0 1 N N N N N N -42.086 0.347 -23.504 2.843 3.965 0.779 "O3'" 6FN 15
6FN "C4'" C9 C 0 1 N N R N N N -42.819 -1.978 -23.677 1.416 2.076 0.184 "C4'" 6FN 16
6FN C33 C10 C 0 1 N N N N N N -42.222 -2.028 -22.290 1.000 2.397 1.558 C33 6FN 17
6FN C34 C11 C 0 1 N N N N N N -41.764 -2.071 -21.198 0.668 2.653 2.655 C34 6FN 18
6FN "O4'" O2 O 0 1 N N N N N N -42.377 -3.149 -24.428 1.941 0.739 0.128 "O4'" 6FN 19
6FN "C5'" C12 C 0 1 N N N N N N -44.340 -1.958 -23.554 0.223 2.206 -0.765 "C5'" 6FN 20
6FN "O5'" O3 O 0 1 N N N N N N -44.922 -2.011 -24.819 -0.859 1.408 -0.282 "O5'" 6FN 21
6FN PA P1 P 0 1 N N N N N N -46.238 -1.062 -25.094 -2.278 1.306 -1.035 PA 6FN 22
6FN O3A O4 O 0 1 N N N N N N -45.750 0.464 -25.455 -3.296 0.429 -0.147 O3A 6FN 23
6FN PB P2 P 0 1 N N N N N N -45.510 1.614 -24.310 -4.890 0.209 -0.163 PB 6FN 24
6FN O3B O5 O 0 1 N N N N N N -46.490 2.891 -24.633 -5.263 -1.083 0.722 O3B 6FN 25
6FN PG P3 P 0 1 N N N N N N -48.118 2.805 -24.417 -6.541 -2.059 0.794 PG 6FN 26
6FN O3G O6 O 0 1 N N N N N N -48.809 2.648 -25.695 -7.780 -1.260 0.663 O3G 6FN 27
6FN O2G O7 O 0 1 N N N N N N -48.623 4.150 -23.610 -6.465 -3.131 -0.406 O2G 6FN 28
6FN O1G O8 O 0 1 N N N N N N -48.504 1.579 -23.715 -6.547 -2.833 2.205 O1G 6FN 29
6FN O2B O9 O 0 1 N N N N N N -45.763 1.106 -22.960 -5.617 1.508 0.451 O2B 6FN 30
6FN O1B O10 O 0 1 N N N N N N -44.101 1.997 -24.235 -5.346 0.001 -1.556 O1B 6FN 31
6FN O2A O11 O 0 1 N N N N N N -47.070 -1.603 -26.163 -2.834 2.665 -1.224 O2A 6FN 32
6FN O1A O12 O 0 1 N N N N N N -47.148 -1.071 -23.948 -2.076 0.604 -2.470 O1A 6FN 33
6FN H1 H1 H 0 1 N N N N N N -41.222 -3.279 -31.998 7.877 -4.205 -1.133 H1 6FN 34
6FN H2 H2 H 0 1 N N N N N N -42.312 -4.161 -31.161 6.347 -4.130 -1.824 H2 6FN 35
6FN H3 H3 H 0 1 N N N N N N -43.762 -3.030 -26.223 2.543 -1.165 -1.564 H3 6FN 36
6FN H4 H4 H 0 1 N N N N N N -40.390 -3.161 -25.199 3.616 0.979 1.363 H4 6FN 37
6FN H5 H5 H 0 1 N N N N N N -40.258 -1.000 -24.481 4.674 2.541 -0.135 H5 6FN 38
6FN H6 H6 H 0 1 N N N N N N -41.038 -0.611 -26.052 3.843 1.855 -1.571 H6 6FN 39
6FN H7 H7 H 0 1 N N N N N N -43.122 -0.475 -25.142 2.266 3.550 -1.175 H7 6FN 40
6FN H8 H8 H 0 1 N N N N N N -42.731 1.031 -23.644 3.585 4.552 0.577 H8 6FN 41
6FN H9 H9 H 0 1 N N N N N N -41.354 -2.109 -20.221 0.371 2.882 3.636 H9 6FN 42
6FN H10 H10 H 0 1 N N N N N N -44.652 -1.033 -23.048 -0.089 3.250 -0.815 H10 6FN 43
6FN H11 H11 H 0 1 N N N N N N -44.669 -2.827 -22.965 0.511 1.866 -1.760 H11 6FN 44
6FN H12 H12 H 0 1 N N N N N N -49.286 4.597 -24.123 -5.677 -3.691 -0.384 H12 6FN 45
6FN H13 H13 H 0 1 N N N N N N -49.070 1.059 -24.273 -7.292 -3.440 2.318 H13 6FN 46
6FN H14 H14 H 0 1 N N N N N N -44.968 1.169 -22.443 -5.366 1.705 1.363 H14 6FN 47
6FN H15 H15 H 0 1 N N N N N N -47.992 -1.414 -24.216 -1.714 -0.291 -2.422 H15 6FN 48
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
6FN N6 C6 SING N N 1
6FN N1 C6 DOUB Y N 2
6FN N1 C2 SING Y N 3
6FN C6 C5 SING Y N 4
6FN F32 C2 SING N N 5
6FN C2 N3 DOUB Y N 6
6FN C5 N7 SING Y N 7
6FN C5 C4 DOUB Y N 8
6FN N7 C8 DOUB Y N 9
6FN N3 C4 SING Y N 10
6FN C4 N9 SING Y N 11
6FN C8 N9 SING Y N 12
6FN N9 "C1'" SING N N 13
6FN O2A PA DOUB N N 14
6FN O3G PG DOUB N N 15
6FN O3A PA SING N N 16
6FN O3A PB SING N N 17
6FN "C1'" "C2'" SING N N 18
6FN "C1'" "O4'" SING N N 19
6FN "C2'" "C3'" SING N N 20
6FN PA "O5'" SING N N 21
6FN PA O1A SING N N 22
6FN "O5'" "C5'" SING N N 23
6FN O3B PG SING N N 24
6FN O3B PB SING N N 25
6FN "O4'" "C4'" SING N N 26
6FN PG O1G SING N N 27
6FN PG O2G SING N N 28
6FN "C3'" "C4'" SING N N 29
6FN "C3'" "O3'" SING N N 30
6FN PB O1B DOUB N N 31
6FN PB O2B SING N N 32
6FN "C4'" "C5'" SING N N 33
6FN "C4'" C33 SING N N 34
6FN C33 C34 TRIP N N 35
6FN N6 H1 SING N N 36
6FN N6 H2 SING N N 37
6FN C8 H3 SING N N 38
6FN "C1'" H4 SING N N 39
6FN "C2'" H5 SING N N 40
6FN "C2'" H6 SING N N 41
6FN "C3'" H7 SING N N 42
6FN "O3'" H8 SING N N 43
6FN C34 H9 SING N N 44
6FN "C5'" H10 SING N N 45
6FN "C5'" H11 SING N N 46
6FN O2G H12 SING N N 47
6FN O1G H13 SING N N 48
6FN O2B H14 SING N N 49
6FN O1A H15 SING N N 50
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
6FN SMILES ACDLabs 12.01 "c21n(cnc1c(nc(n2)F)N)C3CC(C(COP(O)(OP(=O)(O)OP(O)(O)=O)=O)(C#C)O3)O"
6FN InChI InChI 1.03 InChI=1S/C12H15FN5O12P3/c1-2-12(4-27-32(23,24)30-33(25,26)29-31(20,21)22)6(19)3-7(28-12)18-5-15-8-9(14)16-11(13)17-10(8)18/h1,5-7,19H,3-4H2,(H,23,24)(H,25,26)(H2,14,16,17)(H2,20,21,22)/t6-,7+,12+/m0/s1
6FN InChIKey InChI 1.03 BUMPFXRZUYYODO-QRPMWFLTSA-N
6FN SMILES_CANONICAL CACTVS 3.385 "Nc1nc(F)nc2n(cnc12)[C@H]3C[C@H](O)[C@@](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)(O3)C#C"
6FN SMILES CACTVS 3.385 "Nc1nc(F)nc2n(cnc12)[CH]3C[CH](O)[C](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)(O3)C#C"
6FN SMILES_CANONICAL "OpenEye OEToolkits" 2.0.4 "C#C[C@]1([C@H](C[C@@H](O1)n2cnc3c2nc(nc3N)F)O)COP(=O)(O)OP(=O)(O)OP(=O)(O)O"
6FN SMILES "OpenEye OEToolkits" 2.0.4 "C#CC1(C(CC(O1)n2cnc3c2nc(nc3N)F)O)COP(=O)(O)OP(=O)(O)OP(=O)(O)O"
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
6FN "SYSTEMATIC NAME" ACDLabs 12.01 "2'-deoxy-4'-ethynyl-2-fluoroadenosine 5'-(tetrahydrogen triphosphate)"
6FN "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.4 "[[(2~{R},3~{S},5~{R})-5-(6-azanyl-2-fluoranyl-purin-9-yl)-2-ethynyl-3-oxidanyl-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
6FN 'Create component' 2016-03-30 RCSB
6FN 'Initial release' 2016-08-03 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
6FN C4 C 6.897 -4.996 1
6FN N3 N 5.598 -4.246 2
6FN C2 C 4.299 -4.996 3
6FN F32 F 3.000 -4.246 4
6FN N1 N 4.299 -6.496 5
6FN C6 C 5.598 -7.246 6
6FN N6 N 5.598 -8.746 7
6FN C5 C 6.897 -6.496 8
6FN N7 N 8.316 -6.953 9
6FN C8 C 9.192 -5.746 10
6FN N9 N 8.316 -4.539 11
6FN "C1'" C 8.783 -3.113 12
6FN "C2'" C 7.903 -1.898 13
6FN "C3'" C 8.787 -0.686 14
6FN "O3'" O 8.326 0.741 15
6FN "C4'" C 10.213 -1.152 16
6FN C33 C 11.713 -1.155 17
6FN C34 C 13.212 -1.157 18
6FN "O4'" O 10.210 -2.652 19
6FN "C5'" C 10.678 0.274 20
6FN "O5'" O 12.146 0.583 21
6FN PA P 12.612 2.009 22
6FN O3A O 13.078 3.434 23
6FN PB P 12.076 4.551 24
6FN O3B O 11.075 5.667 25
6FN PG P 11.541 7.093 26
6FN O3G O 12.007 8.519 27
6FN O2G O 12.966 6.627 28
6FN O1G O 10.115 7.559 29
6FN O2B O 10.960 3.549 30
6FN O1B O 13.193 5.553 31
6FN O2A O 14.038 1.543 32
6FN O1A O 11.186 2.475 33
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
6FN N6 C6 SINGLE NONE 1
6FN N1 C6 DOUBLE NONE 2
6FN N1 C2 SINGLE NONE 3
6FN C6 C5 SINGLE NONE 4
6FN F32 C2 SINGLE NONE 5
6FN C2 N3 DOUBLE NONE 6
6FN C5 N7 SINGLE NONE 7
6FN C5 C4 DOUBLE NONE 8
6FN N7 C8 DOUBLE NONE 9
6FN N3 C4 SINGLE NONE 10
6FN C4 N9 SINGLE NONE 11
6FN C8 N9 SINGLE NONE 12
6FN "C1'" N9 SINGLE BEGINWEDGE 13
6FN O2A PA DOUBLE NONE 14
6FN O3G PG DOUBLE NONE 15
6FN O3A PA SINGLE NONE 16
6FN O3A PB SINGLE NONE 17
6FN "C1'" "C2'" SINGLE NONE 18
6FN "C1'" "O4'" SINGLE NONE 19
6FN "C2'" "C3'" SINGLE NONE 20
6FN PA "O5'" SINGLE NONE 21
6FN PA O1A SINGLE BEGINDASH 22
6FN "O5'" "C5'" SINGLE NONE 23
6FN O3B PG SINGLE NONE 24
6FN O3B PB SINGLE NONE 25
6FN "O4'" "C4'" SINGLE NONE 26
6FN PG O1G SINGLE NONE 27
6FN PG O2G SINGLE NONE 28
6FN "C3'" "C4'" SINGLE NONE 29
6FN "C3'" "O3'" SINGLE BEGINDASH 30
6FN PB O1B DOUBLE NONE 31
6FN PB O2B SINGLE BEGINWEDGE 32
6FN "C4'" "C5'" SINGLE BEGINWEDGE 33
6FN "C4'" C33 SINGLE NONE 34
6FN C33 C34 TRIPLE NONE 35
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
6FN MurckoScaffold S1 scaffold 'c1ncc2ncn([C@H]3CCCO3)c2n1' InChI=1S/C9H10N4O/c1-2-8(14-3-1)13-6-12-7-4-10-5-11-9(7)13/h4-6,8H,1-3H2/t8-/m1/s1 DAKONNSVCLKUJN-MRVPVSSYSA-N
6FN adenine F1 fragment 'Nc1ncnc2nc[nH]c12' InChI=1S/C5H5N5/c6-4-3-5(9-1-7-3)10-2-8-4/h1-2H,(H3,6,7,8,9,10) GFFGJBXGBJISGV-UHFFFAOYSA-N
6FN deoxyribose F2 fragment 'OCC1OC[CH2]C1O' InChI=1S/C5H10O3/c6-3-5-4(7)1-2-8-5/h4-7H,1-3H2 NSMOSDAEGJTOIQ-UHFFFAOYSA-N
6FN imidazole F3 fragment 'c1c[nH]cn1' InChI=1S/C3H4N2/c1-2-5-3-4-1/h1-3H,(H,4,5) RAXXELZNTBOGNW-UHFFFAOYSA-N
6FN phosphate F4 fragment O=P(O)(O)O InChI=1S/H3O4P/c1-5(2,3)4/h(H3,1,2,3,4) NBIIXXVUZAFLBC-UHFFFAOYSA-N
6FN purine F5 fragment 'c1ncc2[nH]cnc2n1' InChI=1S/C5H4N4/c1-4-5(8-2-6-1)9-3-7-4/h1-3H,(H,6,7,8,9) KDCGOANMDULRCW-UHFFFAOYSA-N
6FN pyrimidine F6 fragment c1cncnc1 InChI=1S/C4H4N2/c1-2-5-4-6-3-1/h1-4H CZPWVGJYEJSRLH-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
6FN C4 S1 1
6FN N3 S1 1
6FN C2 S1 1
6FN N1 S1 1
6FN C6 S1 1
6FN C5 S1 1
6FN N7 S1 1
6FN C8 S1 1
6FN N9 S1 1
6FN "C1'" S1 1
6FN "C2'" S1 1
6FN "C3'" S1 1
6FN "C4'" S1 1
6FN "O4'" S1 1
6FN N1 F1 1
6FN C6 F1 1
6FN C5 F1 1
6FN C4 F1 1
6FN N3 F1 1
6FN C2 F1 1
6FN N9 F1 1
6FN C8 F1 1
6FN N7 F1 1
6FN N6 F1 1
6FN "C1'" F2 1
6FN "C2'" F2 1
6FN "C3'" F2 1
6FN "O3'" F2 1
6FN "C4'" F2 1
6FN "O4'" F2 1
6FN "C5'" F2 1
6FN "O5'" F2 1
6FN C4 F3 1
6FN C5 F3 1
6FN N7 F3 1
6FN C8 F3 1
6FN N9 F3 1
6FN "O5'" F4 1
6FN PA F4 1
6FN O2A F4 1
6FN O3A F4 1
6FN O1A F4 1
6FN O3A F4 2
6FN PB F4 2
6FN O1B F4 2
6FN O3B F4 2
6FN O2B F4 2
6FN O3B F4 3
6FN PG F4 3
6FN O3G F4 3
6FN O1G F4 3
6FN O2G F4 3
6FN N7 F5 1
6FN C8 F5 1
6FN N9 F5 1
6FN C4 F5 1
6FN C5 F5 1
6FN C6 F5 1
6FN N1 F5 1
6FN C2 F5 1
6FN N3 F5 1
6FN C5 F6 1
6FN C6 F6 1
6FN N1 F6 1
6FN C2 F6 1
6FN N3 F6 1
6FN C4 F6 1
#
_pdbe_chem_comp_rdkit_properties.comp_id 6FN
_pdbe_chem_comp_rdkit_properties.exactmw 532.991
_pdbe_chem_comp_rdkit_properties.amw 533.195
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 17
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 7
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 14
_pdbe_chem_comp_rdkit_properties.NumHBD 6
_pdbe_chem_comp_rdkit_properties.NumHBA 17
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 33
_pdbe_chem_comp_rdkit_properties.NumAtoms 48
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 21
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.417
_pdbe_chem_comp_rdkit_properties.NumRings 3
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 5
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 203.943
_pdbe_chem_comp_rdkit_properties.tpsa 258.900
_pdbe_chem_comp_rdkit_properties.CrippenClogP -1.266
_pdbe_chem_comp_rdkit_properties.CrippenMR 98.790
_pdbe_chem_comp_rdkit_properties.chi0v 17.538
_pdbe_chem_comp_rdkit_properties.chi1v 11.814
_pdbe_chem_comp_rdkit_properties.chi2v 6.679
_pdbe_chem_comp_rdkit_properties.chi3v 6.679
_pdbe_chem_comp_rdkit_properties.chi4v 4.747
_pdbe_chem_comp_rdkit_properties.chi0n 29.855
_pdbe_chem_comp_rdkit_properties.chi1n 14.368
_pdbe_chem_comp_rdkit_properties.chi2n 3.164
_pdbe_chem_comp_rdkit_properties.chi3n 3.164
_pdbe_chem_comp_rdkit_properties.chi4n 2.026
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -1.830
_pdbe_chem_comp_rdkit_properties.kappa1 12.227
_pdbe_chem_comp_rdkit_properties.kappa2 8.748
_pdbe_chem_comp_rdkit_properties.kappa3 5.814
_pdbe_chem_comp_rdkit_properties.Phi 3.242
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
6FN UniChem ZINC ZINC000042877555
6FN UniChem fdasrs 7HAE2A23SL
6FN UniChem SureChEMBL SCHEMBL19211131
6FN UniChem BindingDb 50459816
6FN UniChem BRENDA 28916
6FN UniChem MedChemExpress HY-138561
6FN UniChem PubChem 44568060
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
6FN C4 -4.364 0.726 0.487 ETKDGv3 1
6FN N3 -5.129 0.888 1.688 ETKDGv3 2
6FN C2 -6.421 0.694 1.637 ETKDGv3 3
6FN F32 -7.169 0.847 2.755 ETKDGv3 4
6FN N1 -7.056 0.298 0.395 ETKDGv3 5
6FN C6 -6.361 0.128 -0.699 ETKDGv3 6
6FN N6 -6.999 -0.282 -1.908 ETKDGv3 7
6FN C5 -4.913 0.362 -0.640 ETKDGv3 8
6FN N7 -3.917 0.055 -1.609 ETKDGv3 9
6FN C8 -2.793 0.269 -0.988 ETKDGv3 10
6FN N9 -2.954 0.723 0.365 ETKDGv3 11
6FN "C1'" -1.994 0.575 1.456 ETKDGv3 12
6FN "C2'" -1.899 -0.883 1.906 ETKDGv3 13
6FN "C3'" -0.535 -1.305 1.440 ETKDGv3 14
6FN "O3'" 0.045 -2.218 2.337 ETKDGv3 15
6FN "C4'" 0.221 0.031 1.362 ETKDGv3 16
6FN C33 0.836 0.382 2.663 ETKDGv3 17
6FN C34 1.335 0.669 3.723 ETKDGv3 18
6FN "O4'" -0.721 1.028 1.035 ETKDGv3 19
6FN "C5'" 1.325 -0.001 0.290 ETKDGv3 20
6FN "O5'" 0.755 -0.198 -0.983 ETKDGv3 21
6FN PA 2.009 -0.220 -2.138 ETKDGv3 22
6FN O3A 3.063 -1.522 -1.798 ETKDGv3 23
6FN PB 4.621 -0.903 -1.510 ETKDGv3 24
6FN O3B 4.564 0.194 -0.206 ETKDGv3 25
6FN PG 6.091 0.934 -0.080 ETKDGv3 26
6FN O3G 6.114 1.781 1.172 ETKDGv3 27
6FN O2G 6.368 1.932 -1.419 ETKDGv3 28
6FN O1G 7.317 -0.229 0.027 ETKDGv3 29
6FN O2B 5.633 -2.200 -1.115 ETKDGv3 30
6FN O1B 5.139 -0.240 -2.768 ETKDGv3 31
6FN O2A 1.394 -0.457 -3.497 ETKDGv3 32
6FN O1A 2.777 1.294 -2.159 ETKDGv3 33
6FN H1 -6.445 -0.418 -2.782 ETKDGv3 34
6FN H2 -8.030 -0.448 -1.931 ETKDGv3 35
6FN H3 -1.832 0.090 -1.449 ETKDGv3 36
6FN H4 -2.325 1.205 2.311 ETKDGv3 37
6FN H5 -2.694 -1.526 1.467 ETKDGv3 38
6FN H6 -1.965 -0.936 3.016 ETKDGv3 39
6FN H7 -0.640 -1.771 0.432 ETKDGv3 40
6FN H8 0.843 -2.591 1.881 ETKDGv3 41
6FN H9 1.774 0.920 4.652 ETKDGv3 42
6FN H10 2.035 -0.824 0.535 ETKDGv3 43
6FN H11 1.870 0.972 0.318 ETKDGv3 44
6FN H12 5.569 2.513 -1.471 ETKDGv3 45
6FN H13 8.160 0.288 -0.008 ETKDGv3 46
6FN H14 5.249 -2.572 -0.281 ETKDGv3 47
6FN H15 2.042 1.949 -2.266 ETKDGv3 48
#