Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 5XK    

Bonds between two atoms of the molecule

Total Number of Bonds: 42


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C12 C11 C C doub 1.38 N Y
2 C12 C13 C C sing 1.38 N Y
3 C11 C10 C C sing 1.38 N Y
4 CL C13 CL C sing 1.74 N N
5 C13 C14 C C doub 1.4 N Y
6 C10 C9 C C doub 1.39 N Y
7 C14 C9 C C sing 1.4 N Y
8 C14 C15 C C sing 1.47 N N
9 C9 N C N sing 1.39 N N
10 O C15 O C doub 1.22 N N
11 C15 N1 C N sing 1.35 N N
12 N C8 N C sing 1.37 N Y
13 N C16 N C sing 1.37 N Y
14 N1 C16 N C sing 1.39 N N
15 C8 C7 C C doub 1.35 N Y
16 C16 C6 C C doub 1.36 N Y
17 C7 C6 C C sing 1.41 N Y
18 C6 C5 C C sing 1.51 N N
19 C C1 C C sing 1.53 N N
20 C5 C2 C C sing 1.53 N N
21 C1 C2 C C sing 1.53 N N
22 C2 C3 C C sing 1.53 N N
23 C3 C4 C C sing 1.53 N N
24 C4 H1 C H sing 1.09 N N
25 C4 H2 C H sing 1.09 N N
26 C4 H3 C H sing 1.09 N N
27 C5 H4 C H sing 1.09 N N
28 C5 H5 C H sing 1.09 N N
29 C11 H6 C H sing 1.08 N N
30 C7 H7 C H sing 1.08 N N
31 C8 H8 C H sing 1.08 N N
32 C10 H9 C H sing 1.08 N N
33 C12 H10 C H sing 1.08 N N
34 N1 H11 N H sing 0.97 N N
35 C3 H12 C H sing 1.09 N N
36 C3 H13 C H sing 1.09 N N
37 C2 H14 C H sing 1.09 N N
38 C1 H15 C H sing 1.09 N N
39 C1 H16 C H sing 1.09 N N
40 C H17 C H sing 1.09 N N
41 C H18 C H sing 1.09 N N
42 C H19 C H sing 1.09 N N