Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 5XK

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 40


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C4 C C1 N N N 0 -4.704 -0.488 -2.346
2 C14 C C2 N Y N 0 2.12 0.076 0.018
3 C5 C C3 N N N 0 -3.047 -0.013 1.094
4 C6 C C4 N Y N 0 -1.814 -0.836 0.828
5 C11 C C5 N Y N 0 3.805 -2.089 -0.354
6 C7 C C6 N Y N 0 -1.742 -2.241 0.799
7 C8 C C7 N Y N 0 -0.466 -2.579 0.529
8 C9 C C8 N Y N 0 1.617 -1.231 0.109
9 C10 C C9 N Y N 0 2.469 -2.308 -0.079
10 C12 C C10 N Y N 0 4.306 -0.801 -0.434
11 C13 C C11 N Y N 0 3.472 0.285 -0.255
12 N1 N N1 N N N 0 -0.098 0.95 0.489
13 C3 C C12 N N N 0 -4.189 -0.869 -0.957
14 CL CL CL1 N N N 0 4.104 1.899 -0.356
15 C15 C C13 N N N 0 1.198 1.208 0.223
16 O O O1 N N N 0 1.6 2.354 0.152
17 C16 C C14 N Y N 0 -0.567 -0.357 0.573
18 N N N2 N Y N 0 0.266 -1.427 0.388
19 C2 C C15 N N N 0 -3.691 0.385 -0.236
20 C1 C C16 N N N 0 -4.87 1.324 0.029
21 C C C17 N N N 0 -4.354 2.636 0.623
22 H1 H H1 N N N 0 -5.589 0.141 -2.246
23 H2 H H2 N N N 0 -3.929 0.059 -2.883
24 H3 H H3 N N N 0 -4.961 -1.391 -2.899
25 H4 H H4 N N N 0 -3.756 -0.598 1.68
26 H5 H H5 N N N 0 -2.773 0.885 1.648
27 H6 H H6 N N N 0 4.466 -2.931 -0.5
28 H7 H H7 N N N 0 -2.562 -2.925 0.963
29 H8 H H8 N N N 0 -0.084 -3.586 0.439
30 H9 H H9 N N N 0 2.088 -3.317 -0.011
31 H10 H H10 N N N 0 5.353 -0.644 -0.65
32 H11 H H11 N N N 0 -0.714 1.688 0.625
33 H12 H H12 N N N 0 -4.997 -1.322 -0.382
34 H13 H H13 N N N 0 -3.37 -1.581 -1.056
35 H14 H H14 N N N 0 -2.955 0.894 -0.858
36 H15 H H15 N N N 0 -5.39 1.528 -0.907
37 H16 H H16 N N N 0 -5.558 0.853 0.731
38 H17 H H17 N N N 0 -3.928 2.447 1.608
39 H18 H H18 N N N 0 -3.589 3.054 -0.031
40 H19 H H19 N N N 0 -5.179 3.343 0.714