Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Chemical Bonds

 Molecule : 2KB    

Bonds between two atoms of the molecule

Total Number of Bonds: 87


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C1 C4 C C sing 1.54 N N
2 C1 C2 C C sing 1.53 N N
3 N35 C34 N C trip 1.14 N N
4 C4 C5 C C sing 1.51 N N
5 C2 C3 C C sing 1.52 N N
6 C28 C26 C C sing 1.53 N N
7 C13 C14 C C sing 1.53 N N
8 C13 C12 C C sing 1.52 N N
9 C34 C33 C C sing 1.47 N N
10 C31 O19 C O sing 1.43 N N
11 C31 C32 C C sing 1.53 N N
12 C11 C12 C C doub 1.35 Z N
13 C11 C10 C C sing 1.46 N N
14 O19 C15 O C sing 1.43 N N
15 C20 C5 C C sing 1.53 N N
16 C14 O30 C O sing 1.43 N N
17 C14 C15 C C sing 1.53 N N
18 C5 C6 C C sing 1.56 N N
19 C5 C9 C C sing 1.52 N N
20 C12 C17 C C sing 1.48 N N
21 C3 C10 C C doub 1.33 E N
22 C3 C6 C C sing 1.5 N N
23 C33 C32 C C sing 1.53 N N
24 C26 O36 C O sing 1.43 N N
25 C26 C25 C C sing 1.53 N N
26 C26 C27 C C sing 1.53 N N
27 C24 C25 C C sing 1.53 N N
28 C24 C23 C C sing 1.53 N N
29 C21 C9 C C sing 1.53 N N
30 C21 C23 C C sing 1.53 N N
31 C21 C22 C C sing 1.53 N N
32 C6 C7 C C sing 1.53 N N
33 C15 C16 C C sing 1.53 N N
34 C9 C8 C C sing 1.55 N N
35 C17 C29 C C doub 1.33 N N
36 C17 C16 C C sing 1.52 N N
37 C16 O18 C O sing 1.43 N N
38 C7 C8 C C sing 1.55 N N
39 C4 H1 C H sing 1.09 N N
40 C4 H2 C H sing 1.09 N N
41 C6 H3 C H sing 1.09 N N
42 C7 H4 C H sing 1.09 N N
43 C7 H5 C H sing 1.09 N N
44 C8 H6 C H sing 1.09 N N
45 C8 H7 C H sing 1.09 N N
46 C10 H8 C H sing 1.08 N N
47 C13 H9 C H sing 1.09 N N
48 C13 H10 C H sing 1.09 N N
49 C15 H11 C H sing 1.09 N N
50 C20 H12 C H sing 1.09 N N
51 C20 H13 C H sing 1.09 N N
52 C20 H14 C H sing 1.09 N N
53 C21 H15 C H sing 1.09 N N
54 C22 H16 C H sing 1.09 N N
55 C22 H17 C H sing 1.09 N N
56 C22 H18 C H sing 1.09 N N
57 C24 H19 C H sing 1.09 N N
58 C24 H20 C H sing 1.09 N N
59 C28 H21 C H sing 1.09 N N
60 C28 H22 C H sing 1.09 N N
61 C28 H23 C H sing 1.09 N N
62 C33 H24 C H sing 1.09 N N
63 C33 H25 C H sing 1.09 N N
64 C32 H26 C H sing 1.09 N N
65 C32 H27 C H sing 1.09 N N
66 C31 H28 C H sing 1.09 N N
67 C31 H29 C H sing 1.09 N N
68 C14 H30 C H sing 1.09 N N
69 O30 H31 O H sing 0.97 N N
70 C16 H32 C H sing 1.09 N N
71 O18 H33 O H sing 0.97 N N
72 C29 H34 C H sing 1.08 N N
73 C29 H35 C H sing 1.08 N N
74 C11 H36 C H sing 1.08 N N
75 C2 H37 C H sing 1.09 N N
76 C2 H38 C H sing 1.09 N N
77 C9 H39 C H sing 1.09 N N
78 C1 H40 C H sing 1.09 N N
79 C1 H41 C H sing 1.09 N N
80 C23 H42 C H sing 1.09 N N
81 C23 H43 C H sing 1.09 N N
82 C25 H44 C H sing 1.09 N N
83 C25 H45 C H sing 1.09 N N
84 O36 H46 O H sing 0.97 N N
85 C27 H47 C H sing 1.09 N N
86 C27 H48 C H sing 1.09 N N
87 C27 H49 C H sing 1.09 N N