Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 2KB

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 85


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C4 C C1 N N N 0 -3.226 3.41 -0.65
2 C5 C C2 R N N 0 -2.903 2.115 0.057
3 C6 C C3 S N N 0 -1.888 2.438 1.19
4 C7 C C4 N N N 0 -1.836 1.102 1.935
5 C8 C C5 N N N 0 -3.33 0.675 1.978
6 C10 C C6 N N N 0 0.534 2.249 0.673
7 C13 C C7 N N N 0 4.167 2.537 -0.568
8 C15 C C8 S N N 0 5.17 0.306 -0.029
9 C17 C C9 N N N 0 3.036 0.926 1.052
10 C20 C C10 N N N 0 -2.258 1.144 -0.934
11 C21 C C11 R N N 0 -4.69 0.371 -0.132
12 C22 C C12 N N N 0 -5.398 1.101 -1.276
13 C24 C C13 N N N 0 -6.29 -1.546 -0.227
14 C26 C C14 N N N 0 -7.889 -3.463 -0.321
15 C28 C C15 N N N 0 -6.76 -4.382 -0.791
16 N35 N N1 N N N 0 9.892 -5.067 -0.405
17 C34 C C16 N N N 0 9.317 -4.223 0.092
18 C33 C C17 N N N 0 8.573 -3.128 0.735
19 C32 C C18 N N N 0 7.615 -2.498 -0.278
20 C31 C C19 N N N 0 6.841 -1.36 0.391
21 O19 O O1 N N N 0 5.946 -0.773 -0.555
22 C14 C C20 R N N 0 4.861 1.301 -1.149
23 O30 O O2 N N N 0 6.079 1.695 -1.784
24 C16 C C21 R N N 0 3.864 -0.242 0.553
25 O18 O O3 N N N 0 3.142 -0.945 -0.461
26 C29 C C22 N N N 0 2.453 0.907 2.25
27 C12 C C23 N N N 0 2.908 2.086 0.146
28 C11 C C24 N N N 0 1.728 2.714 -0.036
29 C3 C C25 N N N 0 -0.632 2.869 0.492
30 C2 C C26 N N N 0 -0.784 4.066 -0.436
31 C9 C C27 R N N 0 -4.023 1.393 0.79
32 C1 C C28 N N N 0 -1.957 3.862 -1.392
33 C23 C C29 N N N 0 -5.713 -0.443 0.663
34 C25 C C30 N N N 0 -7.312 -2.36 0.568
35 O36 O O4 N N N 0 -8.528 -2.875 -1.456
36 C27 C C31 N N N 0 -8.912 -4.277 0.474
37 H1 H H1 N N N 0 -4.035 3.25 -1.363
38 H2 H H2 N N N 0 -3.52 4.166 0.078
39 H3 H H3 N N N 0 -2.267 3.228 1.839
40 H4 H H4 N N N 0 -1.242 0.375 1.383
41 H5 H H5 N N N 0 -1.444 1.238 2.943
42 H6 H H6 N N N 0 -3.414 -0.405 1.862
43 H7 H H7 N N N 0 -3.782 0.987 2.92
44 H8 H H8 N N N 0 0.598 1.403 1.341
45 H9 H H9 N N N 0 4.832 3.034 0.139
46 H10 H H10 N N N 0 3.906 3.224 -1.373
47 H11 H H11 N N N 0 5.735 0.809 0.756
48 H12 H H12 N N N 0 -1.289 1.534 -1.246
49 H13 H H13 N N N 0 -2.123 0.174 -0.457
50 H14 H H14 N N N 0 -2.902 1.034 -1.806
51 H15 H H15 N N N 0 -3.933 -0.298 -0.542
52 H16 H H16 N N N 0 -6.108 1.819 -0.864
53 H17 H H17 N N N 0 -4.66 1.627 -1.882
54 H18 H H18 N N N 0 -5.929 0.379 -1.895
55 H19 H H19 N N N 0 -6.777 -1.097 -1.093
56 H20 H H20 N N N 0 -5.485 -2.201 -0.561
57 H21 H H21 N N N 0 -6.031 -3.802 -1.357
58 H22 H H22 N N N 0 -6.273 -4.831 0.075
59 H23 H H23 N N N 0 -7.171 -5.168 -1.425
60 H24 H H24 N N N 0 8.004 -3.521 1.577
61 H25 H H25 N N N 0 9.273 -2.372 1.091
62 H26 H H26 N N N 0 8.183 -2.105 -1.12
63 H27 H H27 N N N 0 6.914 -3.254 -0.634
64 H28 H H28 N N N 0 6.272 -1.754 1.233
65 H29 H H29 N N N 0 7.541 -0.605 0.746
66 H30 H H30 N N N 0 4.207 0.829 -1.882
67 H31 H H31 N N N 0 5.959 2.323 -2.509
68 H32 H H32 N N N 0 4.085 -0.916 1.381
69 H33 H H33 N N N 0 2.303 -1.319 -0.159
70 H34 H H34 N N N 0 2.564 0.045 2.892
71 H35 H H35 N N N 0 1.869 1.754 2.58
72 H36 H H36 N N N 0 1.664 3.56 -0.704
73 H37 H H37 N N N 0 -0.957 4.962 0.159
74 H38 H H38 N N N 0 0.132 4.19 -1.014
75 H39 H H39 N N N 0 -4.759 2.109 1.156
76 H40 H H40 N N N 0 -1.688 3.106 -2.129
77 H41 H H41 N N N 0 -2.163 4.801 -1.907
78 H42 H H42 N N N 0 -5.226 -0.892 1.528
79 H43 H H43 N N N 0 -6.518 0.212 0.997
80 H44 H H44 N N N 0 -6.826 -2.809 1.434
81 H45 H H45 N N N 0 -8.117 -1.705 0.903
82 H46 H H46 N N N 0 -9.255 -2.279 -1.233
83 H47 H H47 N N N 0 -9.323 -5.063 -0.16
84 H48 H H48 N N N 0 -8.425 -4.726 1.34
85 H49 H H49 N N N 0 -9.717 -3.622 0.808