Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : MGO

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 53


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 OAJ O OAJ N N N 0 39.36 13.84 56.203
2 PBE P PBE N N N 0 39.809 12.621 57.209
3 OAD O OAD N N N 0 41.013 13.333 58.094
4 OAI O OAI N N N 0 40.204 11.381 56.451
5 OAS O OAS N N N 0 38.55 12.313 58.241
6 PBG P PBG S N N 0 37.334 13.331 58.492
7 OAL O OAL N N N 0 36.709 12.706 59.842
8 OAF O OAF N N N 0 37.742 14.749 58.586
9 OAT O OAT N N N 0 36.328 13.159 57.302
10 PBF P PBF S N N 0 35.22 12.025 57.225
11 OAK O OAK N N N 0 34.478 12.421 55.821
12 OAE O OAE N N N 0 34.308 12.067 58.4
13 O5' O O5* N N N 0 35.955 10.598 57.058
14 C5' C C5* N N N 0 36.412 9.839 58.174
15 C4' C C4* R N N 0 36.057 8.371 58.092
16 O4' O O4* N N N 0 34.635 8.287 58.311
17 C3' C C3* S N N 0 36.225 7.767 56.695
18 O3' O O3* N N N 0 37.545 7.345 56.512
19 C2' C C2* R N N 0 35.315 6.568 56.806
20 O2' O O2* N N N 0 35.803 5.658 57.775
21 C1' C C1* R N N 0 34.093 7.234 57.417
22 NBC N NBC N Y N 0 33.142 7.757 56.356
23 CAN C CAN N Y N 0 32.921 9.049 56.002
24 NBD N NBD N Y N 1 31.971 9.057 55.042
25 CAA C CAA N N N 0 31.461 10.276 54.384
26 CAX C CAX N Y N 0 31.581 7.795 54.768
27 CAW C CAW N Y N 0 32.341 6.972 55.616
28 CAM C CAM N N N 0 32.199 5.589 55.602
29 CAU C CAU N N N 0 31.298 5.014 54.728
30 NAB N NAB N N N 0 31.178 3.689 54.713
31 NAP N NAP N N N 0 30.532 5.814 53.853
32 CAV C CAV N N N 0 30.675 7.206 53.862
33 OAC O OAC N N N 0 29.987 7.866 53.09
34 HAJ H HAJ N N N 0 39.273 14.645 56.7
35 HAD H HAD N N N 0 41.774 13.469 57.542
36 HAL H HAL N N N 0 36.586 11.771 59.731
37 HAK H HAK N N N 0 33.542 12.498 55.967
38 H51 H 1H5* N N N 0 37.508 9.924 58.221
39 H52 H 2H5* N N N 0 35.916 10.244 59.068
40 H4 H H4* N N N 0 36.708 7.846 58.807
41 H3 H H3* N N N 0 36.0 8.45 55.863
42 H1 H H1* N N N 0 33.472 6.529 57.988
43 HA H HA N N N 0 37.722 7.249 55.583
44 H2 H H2* N N N 0 35.181 6.018 55.863
45 HB H HB N N N 0 35.912 4.801 57.379
46 HAN H HAN N N N 0 33.416 9.916 56.414
47 HAA1 H 1HAA N N N 0 31.334 11.072 55.133
48 HAA2 H 2HAA N N N 0 32.177 10.605 53.617
49 HAM H HAM N N N 0 32.786 4.972 56.266
50 HAA3 H 3HAA N N N 0 30.491 10.059 53.912
51 HAB1 H 1HAB N N N 0 31.148 3.367 53.767
52 HAB2 H 2HAB N N N 0 31.961 3.278 55.18
53 HAP H HAP N N N 0 29.884 5.384 53.224