Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 2XM

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 59


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 OAE O OAE N N N 0 4.441 -4.382 1.921
2 CAL C CAL N N N 0 3.653 -4.33 0.73
3 CAN C CAN N N N 0 3.106 -2.913 0.541
4 OAU O OAU N N N 0 4.19 -2.01 0.317
5 CBC C CBC N Y N 0 3.874 -0.701 0.129
6 CAI C CAI N Y N 0 2.552 -0.297 0.16
7 CBB C CBB N Y N 0 4.883 0.235 -0.09
8 OAT O OAT N N N 0 6.183 -0.163 -0.116
9 CAM C CAM N N N 0 7.166 0.848 -0.345
10 CAK C CAK N N N 0 8.559 0.216 -0.34
11 OAD O OAD N N N 0 8.678 -0.684 -1.444
12 CAG C CAG N Y N 0 4.564 1.571 -0.281
13 CAF C CAF N Y N 0 3.247 1.979 -0.256
14 CAZ C CAZ N Y N 0 2.232 1.048 -0.032
15 CBF C CBF N Y N 0 0.819 1.484 -0.005
16 NAS N NAS N Y N 0 -0.207 0.708 0.194
17 SAW S SAW N Y N 0 0.255 3.138 -0.229
18 CBE C CBE N Y N 0 -1.409 2.592 -0.029
19 CAO C CAO N N N 0 -2.637 3.464 -0.083
20 CAJ C CAJ N N N 0 -2.955 3.984 1.319
21 CAA C CAA N N N 0 -4.202 4.869 1.264
22 CBD C CBD N Y N 0 -1.393 1.273 0.184
23 CAP C CAP N N N 0 -2.658 0.482 0.397
24 SAV S SAV N N N 0 -3.277 -0.108 -1.199
25 C2 C C2 N Y N 0 -4.717 -0.973 -0.668
26 N3 N N3 N Y N 0 -5.479 -1.573 -1.571
27 N1 N N1 N Y N 0 -5.006 -1.013 0.625
28 C6 C C6 N Y N 0 -6.086 -1.657 1.062
29 NAB N NAB N N N 0 -6.382 -1.693 2.416
30 C5 C C5 N Y N 0 -6.913 -2.294 0.142
31 C4 C C4 N Y N 0 -6.574 -2.236 -1.206
32 NAC N NAC N N N 0 -7.369 -2.856 -2.158
33 H1 H H1 N N N 0 4.82 -5.252 2.103
34 H2 H H2 N N N 0 4.271 -4.597 -0.127
35 H3 H H3 N N N 0 2.823 -5.031 0.812
36 H4 H H4 N N N 0 2.434 -2.894 -0.316
37 H5 H H5 N N N 0 2.562 -2.612 1.436
38 H6 H H6 N N N 0 1.77 -1.021 0.333
39 H7 H H7 N N N 0 6.984 1.32 -1.311
40 H8 H H8 N N N 0 7.105 1.599 0.443
41 H9 H H9 N N N 0 9.314 0.998 -0.426
42 H10 H H10 N N N 0 8.707 -0.331 0.592
43 H11 H H11 N N N 0 9.538 -1.122 -1.503
44 H12 H H12 N N N 0 5.349 2.293 -0.45
45 H13 H H13 N N N 0 3.001 3.02 -0.405
46 H14 H H14 N N N 0 -2.455 4.306 -0.751
47 H15 H H15 N N N 0 -3.48 2.881 -0.455
48 H16 H H16 N N N 0 -3.137 3.142 1.987
49 H17 H H17 N N N 0 -2.112 4.567 1.691
50 H18 H H18 N N N 0 -5.045 4.287 0.892
51 H19 H H19 N N N 0 -4.429 5.24 2.264
52 H20 H H20 N N N 0 -4.02 5.712 0.597
53 H21 H H21 N N N 0 -2.45 -0.371 1.043
54 H22 H H22 N N N 0 -3.41 1.117 0.866
55 H23 H H23 N N N 0 -5.8 -1.246 3.052
56 H24 H H24 N N N 0 -7.17 -2.164 2.728
57 H25 H H25 N N N 0 -7.796 -2.825 0.468
58 H26 H H26 N N N 0 -8.168 -3.334 -1.885
59 H27 H H27 N N N 0 -7.127 -2.811 -3.096