Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 1RZ

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 41


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 O3G O O3G N N N 0 -4.149 -2.618 1.862
2 PG P PG N N N 0 -4.567 -1.447 0.839
3 O1G O O1G N N N 0 -5.391 -0.443 1.55
4 PB P PB N N N 0 -2.945 0.681 -0.436
5 O2B O O2B N N N 0 -3.634 1.753 0.317
6 O1B O O1B N N N 0 -3.485 0.658 -1.953
7 O3A O O3A N N N 0 -1.359 0.958 -0.435
8 PA P PA N N N 0 -0.455 2.282 -0.583
9 O1A O O1A N N N 0 -1.016 3.359 0.263
10 O2A O O2A N N N 0 -0.446 2.757 -2.121
11 O5' O O5' N N N 0 1.05 1.96 -0.112
12 C5' C C5' N N N 0 2.07 2.957 -0.026
13 C4' C C4' R N N 0 3.373 2.315 0.451
14 O4' O O4' N N N 0 3.803 1.29 -0.464
15 S3' S S3' N N N 0 3.105 1.374 2.011
16 C2' C C2' N N N 0 4.459 0.176 1.652
17 C1' C C1' S N N 0 4.406 0.141 0.105
18 N1 N N1 N N N 0 3.649 -1.042 -0.312
19 C2 C C2 N N N 0 4.077 -2.269 0.04
20 O2 O O2 N N N 0 5.094 -2.382 0.705
21 N3 N N3 N N N 0 3.408 -3.361 -0.325
22 C4 C C4 N N N 0 2.3 -3.267 -1.048
23 N4 N N4 N N N 0 1.617 -4.402 -1.419
24 C5 C C5 N N N 0 1.825 -1.996 -1.433
25 C6 C C6 N N N 0 2.513 -0.895 -1.049
26 O3B O O3B N N N 0 -3.242 -0.74 0.261
27 O2C O O2C N N N 0 -5.416 -2.074 -0.377
28 H1 H H1 N N N 0 -4.899 -3.088 2.25
29 H2 H H2 N N N 0 -3.076 -0.022 -2.506
30 H3 H H3 N N N 0 -0.09 2.099 -2.734
31 H4 H H4 N N N 0 2.224 3.405 -1.008
32 H5 H H5 N N N 0 1.764 3.729 0.681
33 H6 H H6 N N N 0 4.15 3.069 0.58
34 H7 H H7 N N N 0 5.42 0.551 2.004
35 H8 H H8 N N N 0 4.241 -0.804 2.076
36 H9 H H9 N N N 0 5.423 0.054 -0.278
37 H10 H H10 N N N 0 1.946 -5.275 -1.152
38 H11 H H11 N N N 0 0.807 -4.33 -1.947
39 H12 H H12 N N N 0 0.924 -1.903 -2.022
40 H13 H H13 N N N 0 2.169 0.089 -1.332
41 H14 H H14 N N N 0 -4.937 -2.74 -0.888