Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 1HZ

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 54


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 O1P O O1P N N N 0 3.005 -3.343 0.522
2 S S S N N N 0 2.698 -2.14 1.214
3 O2P O O2P N N N 0 2.966 -2.006 2.603
4 C22 C C22 N N N 0 3.326 -0.703 0.303
5 C21 C C21 N N N 0 4.856 -0.707 0.335
6 C19 C C19 N Y N 0 5.377 0.487 -0.422
7 C18 C C18 N Y N 0 5.733 0.361 -1.752
8 C17 C C17 N Y N 0 6.212 1.454 -2.449
9 C16 C C16 N Y N 0 6.336 2.679 -1.819
10 C15 C C15 N Y N 0 5.981 2.812 -0.487
11 O15 O O15 N N N 0 6.102 4.017 0.133
12 C14 C C14 N Y N 0 5.494 1.713 0.213
13 O14 O O14 N N N 0 5.139 1.839 1.52
14 N5' N N5' N N N 0 1.051 -2.014 1.102
15 C5' C C5' N N N 0 0.395 -2.13 -0.203
16 C4' C C4' R N N 0 -1.106 -2.352 -0.001
17 O4' O O4' N N N 0 -1.699 -1.18 0.582
18 C1' C C1' R N N 0 -3.033 -1.068 0.039
19 C2' C C2' R N N 0 -2.85 -1.459 -1.45
20 O2' O O2' N N N 0 -4.073 -1.952 -2.001
21 C3' C C3' S N N 0 -1.789 -2.582 -1.363
22 O3' O O3' N N N 0 -2.416 -3.866 -1.398
23 N9 N N9 N Y N 0 -3.523 0.307 0.155
24 C8 C C8 N Y N 0 -2.758 1.43 0.26
25 N7 N N7 N Y N 0 -3.52 2.481 0.345
26 C5 C C5 N Y N 0 -4.82 2.101 0.301
27 C6 C C6 N Y N 0 -6.05 2.778 0.35
28 N6 N N6 N N N 0 -6.096 4.156 0.47
29 N1 N N1 N Y N 0 -7.169 2.064 0.278
30 C2 C C2 N Y N 0 -7.135 0.749 0.164
31 N3 N N3 N Y N 0 -6.006 0.073 0.114
32 C4 C C4 N Y N 0 -4.837 0.701 0.173
33 H1 H H1 N N N 0 2.984 -0.75 -0.73
34 H2 H H2 N N N 0 2.955 0.211 0.767
35 H3 H H3 N N N 0 5.198 -0.66 1.369
36 H4 H H4 N N N 0 5.226 -1.621 -0.129
37 H5 H H5 N N N 0 5.637 -0.594 -2.247
38 H6 H H6 N N N 0 6.49 1.352 -3.488
39 H7 H H7 N N N 0 6.711 3.532 -2.366
40 H8 H H8 N N N 0 5.312 4.572 0.072
41 H9 H H9 N N N 0 5.861 1.671 2.142
42 H10 H H10 N N N 0 0.52 -1.863 1.9
43 H11 H H11 N N N 0 0.553 -1.214 -0.772
44 H12 H H12 N N N 0 0.817 -2.974 -0.748
45 H13 H H13 N N N 0 -1.269 -3.213 0.648
46 H14 H H14 N N N 0 -3.71 -1.76 0.539
47 H15 H H15 N N N 0 -2.476 -0.615 -2.03
48 H16 H H16 N N N 0 -4.009 -2.209 -2.931
49 H17 H H17 N N N 0 -1.066 -2.488 -2.173
50 H18 H H18 N N N 0 -2.862 -4.064 -2.233
51 H19 H H19 N N N 0 -1.678 1.446 0.27
52 H20 H H20 N N N 0 -5.272 4.666 0.521
53 H21 H H21 N N N 0 -6.951 4.612 0.502
54 H22 H H22 N N N 0 -8.068 0.208 0.109