data_1HZ
#
_chem_comp.id 1HZ
_chem_comp.name "5'-deoxy-5'-({[2-(2,3-dihydroxyphenyl)ethyl]sulfonyl}amino)adenosine"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula 'C18 H22 N6 O7 S'
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2013-02-09
_chem_comp.pdbx_modified_date 2024-09-27
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 466.468
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 1HZ
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 4IZ6
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
_chem_comp.pdbx_pcm Y
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
1HZ O1P O1P O 0 1 N N N N N N -15.070 22.437 13.600 3.005 -3.343 0.522 O1P 1HY 1
1HZ S S S 0 1 N N N N N N -14.206 21.416 14.104 2.698 -2.140 1.214 S 1HY 2
1HZ O2P O2P O 0 1 N N N N N N -13.454 21.862 15.241 2.966 -2.006 2.603 O2P 1HY 3
1HZ C22 C22 C 0 1 N N N N N N -15.114 20.074 14.534 3.326 -0.703 0.303 C22 1HY 4
1HZ C21 C21 C 0 1 N N N N N N -15.751 20.264 15.913 4.856 -0.707 0.335 C21 1HY 5
1HZ C19 C19 C 0 1 Y N N N N N -15.755 19.016 16.800 5.377 0.487 -0.422 C19 1HY 6
1HZ C18 C18 C 0 1 Y N N N N N -15.005 19.036 17.965 5.733 0.361 -1.752 C18 1HY 7
1HZ C17 C17 C 0 1 Y N N N N N -14.975 17.941 18.815 6.212 1.454 -2.449 C17 1HY 8
1HZ C16 C16 C 0 1 Y N N N N N -15.717 16.809 18.512 6.336 2.679 -1.819 C16 1HY 9
1HZ C15 C15 C 0 1 Y N N N N N -16.486 16.771 17.350 5.981 2.812 -0.487 C15 1HY 10
1HZ O15 O15 O 0 1 N N N N N N -17.203 15.632 17.074 6.102 4.017 0.133 O15 1HY 11
1HZ C14 C14 C 0 1 Y N N N N N -16.503 17.886 16.506 5.494 1.713 0.213 C14 1HY 12
1HZ O14 O14 O 0 1 N N N N N N -17.243 17.864 15.373 5.139 1.839 1.520 O14 1HY 13
1HZ "N5'" "N5'" N 0 1 N N N N N N -13.218 21.083 12.903 1.051 -2.014 1.102 "N5'" 1HY 14
1HZ "C5'" "C5'" C 0 1 N N N N N N -12.214 20.056 13.071 0.395 -2.130 -0.203 "C5'" 1HY 15
1HZ "C4'" "C4'" C 0 1 N N R N N N -10.829 20.657 13.266 -1.106 -2.352 -0.001 "C4'" 1HY 16
1HZ "O4'" "O4'" O 0 1 N N N N N N -10.677 21.273 14.548 -1.699 -1.180 0.582 "O4'" 1HY 17
1HZ "C1'" "C1'" C 0 1 N N R N N N -9.326 21.114 14.973 -3.033 -1.068 0.039 "C1'" 1HY 18
1HZ "C2'" "C2'" C 0 1 N N R N N N -8.635 20.260 13.940 -2.850 -1.459 -1.450 "C2'" 1HY 19
1HZ "O2'" "O2'" O 0 1 N N N N N N -8.004 21.177 13.041 -4.073 -1.952 -2.001 "O2'" 1HY 20
1HZ "C3'" "C3'" C 0 1 N N S N N N -9.767 19.583 13.219 -1.789 -2.582 -1.363 "C3'" 1HY 21
1HZ "O3'" "O3'" O 0 1 N N N N N N -9.452 19.343 11.861 -2.416 -3.866 -1.398 "O3'" 1HY 22
1HZ N9 N9 N 0 1 Y N N N N N -9.356 20.412 16.261 -3.523 0.307 0.155 N9 1HY 23
1HZ C8 C8 C 0 1 Y N N N N N -10.422 19.805 16.784 -2.758 1.430 0.260 C8 1HY 24
1HZ N7 N7 N 0 1 Y N N N N N -10.073 19.284 17.984 -3.520 2.481 0.345 N7 1HY 25
1HZ C5 C5 C 0 1 Y N N N N N -8.772 19.559 18.200 -4.820 2.101 0.301 C5 1HY 26
1HZ C6 C6 C 0 1 Y N N N N N -7.886 19.281 19.246 -6.050 2.778 0.350 C6 1HY 27
1HZ N6 N6 N 0 1 N N N N N N -8.282 18.579 20.358 -6.096 4.156 0.470 N6 1HY 28
1HZ N1 N1 N 0 1 Y N N N N N -6.612 19.732 19.123 -7.169 2.064 0.278 N1 1HY 29
1HZ C2 C2 C 0 1 Y N N N N N -6.203 20.419 18.044 -7.135 0.749 0.164 C2 1HY 30
1HZ N3 N3 N 0 1 Y N N N N N -7.030 20.698 17.036 -6.006 0.073 0.114 N3 1HY 31
1HZ C4 C4 C 0 1 Y N N N N N -8.321 20.277 17.096 -4.837 0.701 0.173 C4 1HY 32
1HZ H1 H1 H 0 1 N N N N N N -15.908 19.923 13.788 2.984 -0.750 -0.730 H1 1HY 33
1HZ H2 H2 H 0 1 N N N N N N -14.460 19.190 14.558 2.955 0.211 0.767 H2 1HY 34
1HZ H3 H3 H 0 1 N N N N N N -15.197 21.055 16.439 5.198 -0.660 1.369 H3 1HY 35
1HZ H4 H4 H 0 1 N N N N N N -16.794 20.582 15.767 5.226 -1.621 -0.129 H4 1HY 36
1HZ H5 H5 H 0 1 N N N N N N -14.435 19.919 18.215 5.637 -0.594 -2.247 H5 1HY 37
1HZ H6 H6 H 0 1 N N N N N N -14.374 17.969 19.712 6.490 1.352 -3.488 H6 1HY 38
1HZ H7 H7 H 0 1 N N N N N N -15.699 15.957 19.176 6.711 3.532 -2.366 H7 1HY 39
1HZ H8 H8 H 0 1 N N N N N N -17.061 14.993 17.763 5.312 4.572 0.072 H8 1HY 40
1HZ H9 H9 H 0 1 N N N N N N -17.697 17.032 15.307 5.861 1.671 2.142 H9 1HY 41
1HZ H10 H10 H 0 1 N N N N N N -12.734 21.929 12.681 0.520 -1.863 1.900 H10 1HY 42
1HZ H11 H11 H 0 1 N N N N N N -12.468 19.449 13.953 0.553 -1.214 -0.772 H11 1HY 43
1HZ H12 H12 H 0 1 N N N N N N -12.203 19.417 12.176 0.817 -2.974 -0.748 H12 1HY 44
1HZ H13 H13 H 0 1 N N N N N N -10.639 21.388 12.466 -1.269 -3.213 0.648 H13 1HY 45
1HZ H14 H14 H 0 1 N N N N N N -8.816 22.084 15.068 -3.710 -1.760 0.539 H14 1HY 46
1HZ H15 H15 H 0 1 N N N N N N -7.938 19.540 14.393 -2.476 -0.615 -2.030 H15 1HY 47
1HZ H16 H16 H 0 1 N N N N N N -7.286 21.612 13.485 -4.009 -2.209 -2.931 H16 1HY 48
1HZ H17 H17 H 0 1 N N N N N N -10.094 18.675 13.748 -1.066 -2.488 -2.173 H17 1HY 49
1HZ H18 H18 H 0 1 N N N N N N -8.784 18.669 11.805 -2.862 -4.064 -2.233 H18 1HY 50
1HZ H19 H19 H 0 1 N N N N N N -11.399 19.740 16.328 -1.678 1.446 0.270 H19 1HY 51
1HZ H20 H20 H 0 1 N N N N N N -7.509 18.485 20.986 -5.272 4.666 0.521 H20 1HY 52
1HZ H21 H21 H 0 1 N N N N N N -9.025 19.069 20.814 -6.951 4.612 0.502 H21 1HY 53
1HZ H22 H22 H 0 1 N N N N N N -5.178 20.754 17.991 -8.068 0.208 0.109 H22 1HY 54
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
1HZ "O3'" "C3'" SING N N 1
1HZ "N5'" "C5'" SING N N 2
1HZ "N5'" S SING N N 3
1HZ "O2'" "C2'" SING N N 4
1HZ "C5'" "C4'" SING N N 5
1HZ "C3'" "C4'" SING N N 6
1HZ "C3'" "C2'" SING N N 7
1HZ "C4'" "O4'" SING N N 8
1HZ O1P S DOUB N N 9
1HZ "C2'" "C1'" SING N N 10
1HZ S C22 SING N N 11
1HZ S O2P DOUB N N 12
1HZ C22 C21 SING N N 13
1HZ "O4'" "C1'" SING N N 14
1HZ "C1'" N9 SING N N 15
1HZ O14 C14 SING N N 16
1HZ C21 C19 SING N N 17
1HZ N9 C8 SING Y N 18
1HZ N9 C4 SING Y N 19
1HZ C14 C19 DOUB Y N 20
1HZ C14 C15 SING Y N 21
1HZ C8 N7 DOUB Y N 22
1HZ C19 C18 SING Y N 23
1HZ N3 C4 DOUB Y N 24
1HZ N3 C2 SING Y N 25
1HZ O15 C15 SING N N 26
1HZ C4 C5 SING Y N 27
1HZ C15 C16 DOUB Y N 28
1HZ C18 C17 DOUB Y N 29
1HZ N7 C5 SING Y N 30
1HZ C2 N1 DOUB Y N 31
1HZ C5 C6 DOUB Y N 32
1HZ C16 C17 SING Y N 33
1HZ N1 C6 SING Y N 34
1HZ C6 N6 SING N N 35
1HZ C22 H1 SING N N 36
1HZ C22 H2 SING N N 37
1HZ C21 H3 SING N N 38
1HZ C21 H4 SING N N 39
1HZ C18 H5 SING N N 40
1HZ C17 H6 SING N N 41
1HZ C16 H7 SING N N 42
1HZ O15 H8 SING N N 43
1HZ O14 H9 SING N N 44
1HZ "N5'" H10 SING N N 45
1HZ "C5'" H11 SING N N 46
1HZ "C5'" H12 SING N N 47
1HZ "C4'" H13 SING N N 48
1HZ "C1'" H14 SING N N 49
1HZ "C2'" H15 SING N N 50
1HZ "O2'" H16 SING N N 51
1HZ "C3'" H17 SING N N 52
1HZ "O3'" H18 SING N N 53
1HZ C8 H19 SING N N 54
1HZ N6 H20 SING N N 55
1HZ N6 H21 SING N N 56
1HZ C2 H22 SING N N 57
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
1HZ SMILES ACDLabs 12.01 'O=S(=O)(NCC3OC(n2cnc1c(ncnc12)N)C(O)C3O)CCc4cccc(O)c4O'
1HZ InChI InChI 1.03 'InChI=1S/C18H22N6O7S/c19-16-12-17(21-7-20-16)24(8-22-12)18-15(28)14(27)11(31-18)6-23-32(29,30)5-4-9-2-1-3-10(25)13(9)26/h1-3,7-8,11,14-15,18,23,25-28H,4-6H2,(H2,19,20,21)/t11-,14-,15-,18-/m1/s1'
1HZ InChIKey InChI 1.03 JESVQFVPCGDKBX-XKLVTHTNSA-N
1HZ SMILES_CANONICAL CACTVS 3.370 'Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CN[S](=O)(=O)CCc4cccc(O)c4O)[C@@H](O)[C@H]3O'
1HZ SMILES CACTVS 3.370 'Nc1ncnc2n(cnc12)[CH]3O[CH](CN[S](=O)(=O)CCc4cccc(O)c4O)[CH](O)[CH]3O'
1HZ SMILES_CANONICAL 'OpenEye OEToolkits' 1.7.6 'c1cc(c(c(c1)O)O)CCS(=O)(=O)NC[C@@H]2[C@H]([C@H]([C@@H](O2)n3cnc4c3ncnc4N)O)O'
1HZ SMILES 'OpenEye OEToolkits' 1.7.6 'c1cc(c(c(c1)O)O)CCS(=O)(=O)NCC2C(C(C(O2)n3cnc4c3ncnc4N)O)O'
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
1HZ 'SYSTEMATIC NAME' ACDLabs 12.01 "5'-deoxy-5'-({[2-(2,3-dihydroxyphenyl)ethyl]sulfonyl}amino)adenosine"
1HZ 'SYSTEMATIC NAME' 'OpenEye OEToolkits' 1.7.6 'N-[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl]-2-[2,3-bis(oxidanyl)phenyl]ethanesulfonamide'
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
1HZ 'Create component' 2013-02-09 RCSB
1HZ 'Initial release' 2013-07-31 RCSB
1HZ 'Modify PCM' 2024-09-27 PDBE
#
_pdbx_chem_comp_pcm.pcm_id 1
_pdbx_chem_comp_pcm.comp_id 1HZ
_pdbx_chem_comp_pcm.modified_residue_id 4HH
_pdbx_chem_comp_pcm.type None
_pdbx_chem_comp_pcm.category 'Covalent chemical modification'
_pdbx_chem_comp_pcm.position 'Amino-acid side chain'
_pdbx_chem_comp_pcm.polypeptide_position 'Any position'
_pdbx_chem_comp_pcm.comp_id_linking_atom C21
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom SU
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ?
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ?
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
1HZ O1P O 13.592 1.629 1
1HZ S S 12.713 2.844 2
1HZ O2P O 11.833 4.059 3
1HZ C22 C 13.928 3.723 4
1HZ C21 C 15.297 3.111 5
1HZ C19 C 16.512 3.990 6
1HZ C18 C 16.358 5.482 7
1HZ C17 C 17.573 6.362 8
1HZ C16 C 18.942 5.750 9
1HZ C15 C 19.096 4.257 10
1HZ O15 O 20.466 3.645 11
1HZ C14 C 17.881 3.378 12
1HZ O14 O 18.036 1.886 13
1HZ "N5'" N 11.498 1.964 14
1HZ "C5'" C 10.129 2.577 15
1HZ "C4'" C 8.913 1.697 16
1HZ "O4'" O 8.911 0.197 17
1HZ "C1'" C 7.483 -0.264 18
1HZ "C2'" C 6.604 0.951 19
1HZ "O2'" O 5.104 0.954 20
1HZ "C3'" C 7.487 2.163 21
1HZ "O3'" O 7.027 3.590 22
1HZ N9 N 7.018 -1.690 23
1HZ C8 C 7.893 -2.897 24
1HZ N7 N 7.018 -4.104 25
1HZ C5 C 5.598 -3.647 26
1HZ C6 C 4.299 -4.397 27
1HZ N6 N 4.299 -5.897 28
1HZ N1 N 3.000 -3.647 29
1HZ C2 C 3.000 -2.147 30
1HZ N3 N 4.299 -1.397 31
1HZ C4 C 5.598 -2.147 32
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
1HZ "C3'" "O3'" SINGLE BEGINDASH 1
1HZ "N5'" "C5'" SINGLE NONE 2
1HZ "N5'" S SINGLE NONE 3
1HZ "C2'" "O2'" SINGLE BEGINDASH 4
1HZ "C4'" "C5'" SINGLE BEGINWEDGE 5
1HZ "C3'" "C4'" SINGLE NONE 6
1HZ "C3'" "C2'" SINGLE NONE 7
1HZ "C4'" "O4'" SINGLE NONE 8
1HZ O1P S DOUBLE NONE 9
1HZ "C2'" "C1'" SINGLE NONE 10
1HZ S C22 SINGLE NONE 11
1HZ S O2P DOUBLE NONE 12
1HZ C22 C21 SINGLE NONE 13
1HZ "O4'" "C1'" SINGLE NONE 14
1HZ "C1'" N9 SINGLE BEGINWEDGE 15
1HZ O14 C14 SINGLE NONE 16
1HZ C21 C19 SINGLE NONE 17
1HZ N9 C8 SINGLE NONE 18
1HZ N9 C4 SINGLE NONE 19
1HZ C14 C19 SINGLE NONE 20
1HZ C14 C15 DOUBLE NONE 21
1HZ C8 N7 DOUBLE NONE 22
1HZ C19 C18 DOUBLE NONE 23
1HZ N3 C4 SINGLE NONE 24
1HZ N3 C2 DOUBLE NONE 25
1HZ O15 C15 SINGLE NONE 26
1HZ C4 C5 DOUBLE NONE 27
1HZ C15 C16 SINGLE NONE 28
1HZ C18 C17 SINGLE NONE 29
1HZ N7 C5 SINGLE NONE 30
1HZ C2 N1 SINGLE NONE 31
1HZ C5 C6 SINGLE NONE 32
1HZ C16 C17 DOUBLE NONE 33
1HZ N1 C6 DOUBLE NONE 34
1HZ C6 N6 SINGLE NONE 35
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
1HZ MurckoScaffold S1 scaffold 'O=S(=O)(CCc1ccccc1)NC[C@@H]1CC[C@H](n2cnc3cncnc32)O1' InChI=1S/C18H21N5O3S/c24-27(25,9-8-14-4-2-1-3-5-14)22-10-15-6-7-17(26-15)23-13-21-16-11-19-12-20-18(16)23/h1-5,11-13,15,17,22H,6-10H2/t15-,17+/m0/s1 PRWBRYNMRRIPDS-DOTOQJQBSA-N
1HZ adenine F1 fragment 'Nc1ncnc2nc[nH]c12' InChI=1S/C5H5N5/c6-4-3-5(9-1-7-3)10-2-8-4/h1-2H,(H3,6,7,8,9,10) GFFGJBXGBJISGV-UHFFFAOYSA-N
1HZ imidazole F2 fragment 'c1c[nH]cn1' InChI=1S/C3H4N2/c1-2-5-3-4-1/h1-3H,(H,4,5) RAXXELZNTBOGNW-UHFFFAOYSA-N
1HZ phenyl F3 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
1HZ purine F4 fragment 'c1ncc2[nH]cnc2n1' InChI=1S/C5H4N4/c1-4-5(8-2-6-1)9-3-7-4/h1-3H,(H,6,7,8,9) KDCGOANMDULRCW-UHFFFAOYSA-N
1HZ pyrimidine F5 fragment c1cncnc1 InChI=1S/C4H4N2/c1-2-5-4-6-3-1/h1-4H CZPWVGJYEJSRLH-UHFFFAOYSA-N
1HZ Z54078455 F6 fragment CS(=O)(=O)NCC1CCCO1 InChI=1S/C6H13NO3S/c1-11(8,9)7-5-6-3-2-4-10-6/h6-7H,2-5H2,1H3 STPKQVRNXGFCBB-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
1HZ O1P S1 1
1HZ S S1 1
1HZ O2P S1 1
1HZ C22 S1 1
1HZ C21 S1 1
1HZ C19 S1 1
1HZ C18 S1 1
1HZ C17 S1 1
1HZ C16 S1 1
1HZ C15 S1 1
1HZ C14 S1 1
1HZ "N5'" S1 1
1HZ "C5'" S1 1
1HZ "C4'" S1 1
1HZ "O4'" S1 1
1HZ "C1'" S1 1
1HZ "C2'" S1 1
1HZ "C3'" S1 1
1HZ N9 S1 1
1HZ C8 S1 1
1HZ N7 S1 1
1HZ C5 S1 1
1HZ C6 S1 1
1HZ N1 S1 1
1HZ C2 S1 1
1HZ N3 S1 1
1HZ C4 S1 1
1HZ N1 F1 1
1HZ C6 F1 1
1HZ C5 F1 1
1HZ C4 F1 1
1HZ N3 F1 1
1HZ C2 F1 1
1HZ N9 F1 1
1HZ C8 F1 1
1HZ N7 F1 1
1HZ N6 F1 1
1HZ C5 F2 1
1HZ C4 F2 1
1HZ N9 F2 1
1HZ C8 F2 1
1HZ N7 F2 1
1HZ C19 F3 1
1HZ C14 F3 1
1HZ C15 F3 1
1HZ C16 F3 1
1HZ C17 F3 1
1HZ C18 F3 1
1HZ N7 F4 1
1HZ C8 F4 1
1HZ N9 F4 1
1HZ C4 F4 1
1HZ C5 F4 1
1HZ C6 F4 1
1HZ N1 F4 1
1HZ C2 F4 1
1HZ N3 F4 1
1HZ C5 F5 1
1HZ C4 F5 1
1HZ N3 F5 1
1HZ C2 F5 1
1HZ N1 F5 1
1HZ C6 F5 1
1HZ C22 F6 1
1HZ S F6 1
1HZ O1P F6 1
1HZ O2P F6 1
1HZ "N5'" F6 1
1HZ "C5'" F6 1
1HZ "C4'" F6 1
1HZ "C3'" F6 1
1HZ "C2'" F6 1
1HZ "C1'" F6 1
1HZ "O4'" F6 1
#
_pdbe_chem_comp_rdkit_properties.comp_id 1HZ
_pdbe_chem_comp_rdkit_properties.exactmw 466.127
_pdbe_chem_comp_rdkit_properties.amw 466.476
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 13
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 7
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 12
_pdbe_chem_comp_rdkit_properties.NumHBD 6
_pdbe_chem_comp_rdkit_properties.NumHBA 12
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 32
_pdbe_chem_comp_rdkit_properties.NumAtoms 54
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 14
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.389
_pdbe_chem_comp_rdkit_properties.NumRings 4
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 4
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 213.168
_pdbe_chem_comp_rdkit_properties.tpsa 205.940
_pdbe_chem_comp_rdkit_properties.CrippenClogP -3.188
_pdbe_chem_comp_rdkit_properties.CrippenMR 106.408
_pdbe_chem_comp_rdkit_properties.chi0v 15.766
_pdbe_chem_comp_rdkit_properties.chi1v 9.345
_pdbe_chem_comp_rdkit_properties.chi2v 4.278
_pdbe_chem_comp_rdkit_properties.chi3v 4.278
_pdbe_chem_comp_rdkit_properties.chi4v 2.666
_pdbe_chem_comp_rdkit_properties.chi0n 36.949
_pdbe_chem_comp_rdkit_properties.chi1n 18.379
_pdbe_chem_comp_rdkit_properties.chi2n 3.587
_pdbe_chem_comp_rdkit_properties.chi3n 3.587
_pdbe_chem_comp_rdkit_properties.chi4n 2.186
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.040
_pdbe_chem_comp_rdkit_properties.kappa1 7.776
_pdbe_chem_comp_rdkit_properties.kappa2 8.478
_pdbe_chem_comp_rdkit_properties.kappa3 4.176
_pdbe_chem_comp_rdkit_properties.Phi 2.060
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
1HZ UniChem ZINC ZINC000095920671
1HZ UniChem PubChem 137347961
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
1HZ O1P 0.338 2.629 -1.940 ETKDGv3 1
1HZ S 0.930 1.343 -1.435 ETKDGv3 2
1HZ O2P 0.901 0.327 -2.545 ETKDGv3 3
1HZ C22 2.621 1.652 -0.952 ETKDGv3 4
1HZ C21 3.265 0.399 -0.356 ETKDGv3 5
1HZ C19 4.720 0.648 -0.036 ETKDGv3 6
1HZ C18 5.072 0.993 1.217 ETKDGv3 7
1HZ C17 6.483 1.253 1.556 ETKDGv3 8
1HZ C16 7.427 1.161 0.615 ETKDGv3 9
1HZ C15 7.060 0.807 -0.774 ETKDGv3 10
1HZ O15 8.048 0.727 -1.753 ETKDGv3 11
1HZ C14 5.778 0.568 -1.095 ETKDGv3 12
1HZ O14 5.468 0.255 -2.420 ETKDGv3 13
1HZ "N5'" 0.016 0.797 -0.057 ETKDGv3 14
1HZ "C5'" -0.196 -0.653 -0.118 ETKDGv3 15
1HZ "C4'" -0.791 -1.157 1.207 ETKDGv3 16
1HZ "O4'" -2.039 -0.537 1.432 ETKDGv3 17
1HZ "C1'" -3.057 -1.489 1.202 ETKDGv3 18
1HZ "C2'" -2.422 -2.793 0.725 ETKDGv3 19
1HZ "O2'" -3.077 -3.905 1.279 ETKDGv3 20
1HZ "C3'" -0.995 -2.669 1.202 ETKDGv3 21
1HZ "O3'" -0.857 -3.161 2.512 ETKDGv3 22
1HZ N9 -4.006 -0.977 0.212 ETKDGv3 23
1HZ C8 -5.137 -1.692 -0.315 ETKDGv3 24
1HZ N7 -6.098 -0.924 -0.743 ETKDGv3 25
1HZ C5 -5.628 0.393 -0.485 ETKDGv3 26
1HZ C6 -6.331 1.673 -0.631 ETKDGv3 27
1HZ N6 -7.623 1.748 -1.231 ETKDGv3 28
1HZ N1 -5.739 2.752 -0.191 ETKDGv3 29
1HZ C2 -4.431 2.692 0.433 ETKDGv3 30
1HZ N3 -3.815 1.547 0.572 ETKDGv3 31
1HZ C4 -4.452 0.362 0.079 ETKDGv3 32
1HZ H1 3.187 1.987 -1.848 ETKDGv3 33
1HZ H2 2.633 2.471 -0.201 ETKDGv3 34
1HZ H3 2.715 0.111 0.567 ETKDGv3 35
1HZ H4 3.172 -0.459 -1.054 ETKDGv3 36
1HZ H5 4.327 1.082 1.998 ETKDGv3 37
1HZ H6 6.752 1.518 2.570 ETKDGv3 38
1HZ H7 8.462 1.352 0.870 ETKDGv3 39
1HZ H8 9.021 0.905 -1.534 ETKDGv3 40
1HZ H9 4.524 0.094 -2.744 ETKDGv3 41
1HZ H10 -0.920 1.263 -0.109 ETKDGv3 42
1HZ H11 -0.881 -0.902 -0.960 ETKDGv3 43
1HZ H12 0.775 -1.169 -0.286 ETKDGv3 44
1HZ H13 -0.095 -0.875 2.028 ETKDGv3 45
1HZ H14 -3.595 -1.654 2.162 ETKDGv3 46
1HZ H15 -2.437 -2.847 -0.390 ETKDGv3 47
1HZ H16 -2.731 -4.702 0.798 ETKDGv3 48
1HZ H17 -0.288 -3.188 0.511 ETKDGv3 49
1HZ H18 -0.677 -4.135 2.435 ETKDGv3 50
1HZ H19 -5.204 -2.771 -0.337 ETKDGv3 51
1HZ H20 -8.110 2.667 -1.325 ETKDGv3 52
1HZ H21 -8.097 0.887 -1.584 ETKDGv3 53
1HZ H22 -3.967 3.599 0.795 ETKDGv3 54
#