MGnify API: archiving, analysis and integration of metagenomics data. EMBL-EBI

Retrieves list of biomes for the given super study id
Example:
---
`/super-studies/1/biomes` retrieve linked biomes

GET /metagenomics/api/v1/super-studies/4/biomes?format=api

HTTP 200 OK
Allow: GET, HEAD, OPTIONS
Content-Type: application/json
Vary: Accept

{
    "links": {
        "first": "https://www.ebi.ac.uk/metagenomics/api/v1/super-studies/4/biomes?format=api&page=1",
        "last": "https://www.ebi.ac.uk/metagenomics/api/v1/super-studies/4/biomes?format=api&page=1",
        "next": null,
        "prev": null
    },
    "data": [
        {
            "type": "biomes",
            "id": "root:Host-associated:Birds:Digestive system",
            "attributes": {
                "samples-count": 2034,
                "biome-name": "Digestive system",
                "lineage": "root:Host-associated:Birds:Digestive system"
            },
            "relationships": {
                "studies": {
                    "links": {
                        "related": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Host-associated:Birds:Digestive%20system/studies?format=api"
                    }
                },
                "children": {
                    "links": {
                        "related": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Host-associated:Birds:Digestive%20system/children?format=api"
                    }
                },
                "genomes": {
                    "links": {
                        "related": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Host-associated:Birds:Digestive%20system/genomes?format=api"
                    }
                },
                "samples": {
                    "links": {
                        "related": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Host-associated:Birds:Digestive%20system/samples?format=api"
                    }
                }
            },
            "links": {
                "self": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Host-associated:Birds:Digestive%20system?format=api"
            }
        },
        {
            "type": "biomes",
            "id": "root:Host-associated:Fish:Digestive system",
            "attributes": {
                "samples-count": 1180,
                "biome-name": "Digestive system",
                "lineage": "root:Host-associated:Fish:Digestive system"
            },
            "relationships": {
                "studies": {
                    "links": {
                        "related": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Host-associated:Fish:Digestive%20system/studies?format=api"
                    }
                },
                "children": {
                    "links": {
                        "related": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Host-associated:Fish:Digestive%20system/children?format=api"
                    }
                },
                "genomes": {
                    "links": {
                        "related": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Host-associated:Fish:Digestive%20system/genomes?format=api"
                    }
                },
                "samples": {
                    "links": {
                        "related": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Host-associated:Fish:Digestive%20system/samples?format=api"
                    }
                }
            },
            "links": {
                "self": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Host-associated:Fish:Digestive%20system?format=api"
            }
        }
    ],
    "meta": {
        "pagination": {
            "page": 1,
            "pages": 1,
            "count": 2
        }
    }
}

MGnify

Biomes