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CHEBI:76705 - d(Gs)19dG

ChEBI IDCHEBI:76705
ChEBI Named(Gs)19dG
Stars
ASCII Named(Gs)19dG
DefinitionA phosphorothioate oligonucleotide consisting of twenty 2'-deoxyguanosine residues connected via 3'→5' phosphodiester linkages.
Last Modified16 December 2013
SubmitterMarcus Ennis
DownloadsMolfile
FormulaC200H242N100O101P20S20
Net Charge0
Average Mass6923.555
Monoisotopic Mass6918.60409
SMILESNc1nc(=O)c2ncn([C@H]3C[C@H](OP(=O)(O)S)[C@@H](COP(=O)(S)O[C@H]4C[C@H](n5cnc6c(=O)nc(N)nc65)O[C@@H]4COP(=O)(S)O[C@H]4C[C@H](n5cnc6c(=O)nc(N)nc65)O[C@@H]4COP(=O)(S)O[C@H]4C[C@H](n5cnc6c(=O)nc(N)nc65)O[C@@H]4COP(=O)(S)O[C@H]4C[C@H](n5cnc6c(=O)nc(N)nc65)O[C@@H]4COP(=O)(S)O[C@H]4C[C@H](n5cnc6c(=O)nc(N)nc65)O[C@@H]4COP(=O)(S)O[C@H]4C[C@H](n5cnc6c(=O)nc(N)nc65)O[C@@H]4COP(=O)(S)O[C@H]4C[C@H](n5cnc6c(=O)nc(N)nc65)O[C@@H]4COP(=O)(S)O[C@H]4C[C@H](n5cnc6c(=O)nc(N)nc65)O[C@@H]4COP(=O)(S)O[C@H]4C[C@H](n5cnc6c(=O)nc(N)nc65)O[C@@H]4COP(=O)(S)O[C@H]4C[C@H](n5cnc6c(=O)nc(N)nc65)O[C@@H]4COP(=O)(S)O[C@H]4C[C@H](n5cnc6c(=O)nc(N)nc65)O[C@@H]4COP(=O)(S)O[C@H]4C[C@H](n5cnc6c(=O)nc(N)nc65)O[C@@H]4COP(=O)(S)O[C@H]4C[C@H](n5cnc6c(=O)nc(N)nc65)O[C@@H]4COP(=O)(S)O[C@H]4C[C@H](n5cnc6c(=O)nc(N)nc65)O[C@@H]4COP(=O)(S)O[C@H]4C[C@H](n5cnc6c(=O)nc(N)nc65)O[C@@H]4COP(=O)(S)O[C@H]4C[C@H](n5cnc6c(=O)nc(N)nc65)O[C@@H]4COP(=O)(S)O[C@H]4C[C@H](n5cnc6c(=O)nc(N)nc65)O[C@@H]4COP(=O)(S)O[C@H]4C[C@H](n5cnc6c(=O)nc(N)nc65)O[C@@H]4COP(=O)(S)O[C@H]4C[C@H](n5cnc6c(=O)nc(N)nc65)O[C@@H]4CO)O3)c2n1
InChIInChI=1S/C200H242N100O101P20S20/c201-181-241-141-121(161(302)261-181)221-41-281(141)101-1-61(81(21-301)362-101)383-403(324,423)344-23-83-63(3-103(364-83)283-43-223-123-143(283)243-183(203)263-163(123)304)385-405(326,425)346-25-85-65(5-105(366-85)285-45-225-125-145(285)245-185(205)265-165(125)306)387-407(328,427)348-27-87-67(7-107(368-87)287-47-227-127-147(287)247-187(207)267-167(127)308)389-409(330,429)350-29-89-69(9-109(370-89)289-49-229-129-149(289)249-189(209)269-169(129)310)391-411(332,431)352-31-91-71(11-111(372-91)291-51-231-131-151(291)251-191(211)271-171(131)312)393-413(334,433)354-33-93-73(13-113(374-93)293-53-233-133-153(293)253-193(213)273-173(133)314)395-415(336,435)356-35-95-75(15-115(376-95)295-55-235-135-155(295)255-195(215)275-175(135)316)397-417(338,437)358-37-97-77(17-117(378-97)297-57-237-137-157(297)257-197(217)277-177(137)318)399-419(340,439)360-39-99-79(19-119(380-99)299-59-239-139-159(299)259-199(219)279-179(139)320)401-421(342,441)361-40-100-80(20-120(381-100)300-60-240-140-160(300)260-200(220)280-180(140)321)400-420(341,440)359-38-98-78(18-118(379-98)298-58-238-138-158(298)258-198(218)278-178(138)319)398-418(339,438)357-36-96-76(16-116(377-96)296-56-236-136-156(296)256-196(216)276-176(136)317)396-416(337,436)355-34-94-74(14-114(375-94)294-54-234-134-154(294)254-194(214)274-174(134)315)394-414(335,434)353-32-92-72(12-112(373-92)292-52-232-132-152(292)252-192(212)272-172(132)313)392-412(333,432)351-30-90-70(10-110(371-90)290-50-230-130-150(290)250-190(210)270-170(130)311)390-410(331,430)349-28-88-68(8-108(369-88)288-48-228-128-148(288)248-188(208)268-168(128)309)388-408(329,428)347-26-86-66(6-106(367-86)286-46-226-126-146(286)246-186(206)266-166(126)307)386-406(327,426)345-24-84-64(4-104(365-84)284-44-224-124-144(284)244-184(204)264-164(124)305)384-404(325,424)343-22-82-62(382-402(322,323)422)2-102(363-82)282-42-222-122-142(282)242-182(202)262-162(122)303/h41-120,301H,1-40H2,(H,324,423)(H,325,424)(H,326,425)(H,327,426)(H,328,427)(H,329,428)(H,330,429)(H,331,430)(H,332,431)(H,333,432)(H,334,433)(H,335,434)(H,336,435)(H,337,436)(H,338,437)(H,339,438)(H,340,439)(H,341,440)(H,342,441)(H2,322,323,422)(H3,201,241,261,302)(H3,202,242,262,303)(H3,203,243,263,304)(H3,204,244,264,305)(H3,205,245,265,306)(H3,206,246,266,307)(H3,207,247,267,308)(H3,208,248,268,309)(H3,209,249,269,310)(H3,210,250,270,311)(H3,211,251,271,312)(H3,212,252,272,313)(H3,213,253,273,314)(H3,214,254,274,315)(H3,215,255,275,316)(H3,216,256,276,317)(H3,217,257,277,318)(H3,218,258,278,319)(H3,219,259,279,320)(H3,220,260,280,321)/t61-,62-,63-,64-,65-,66-,67-,68-,69-,70-,71-,72-,73-,74-,75-,76-,77-,78-,79-,80-,81+,82+,83+,84+,85+,86+,87+,88+,89+,90+,91+,92+,93+,94+,95+,96+,97+,98+,99+,100+,101+,102+,103+,104+,105+,106+,107+,108+,109+,110+,111+,112+,113+,114+,115+,116+,117+,118+,119+,120+,403?,404?,405?,406?,407?,408?,409?,410?,411?,412?,413?,414?,415?,416?,417?,418?,419?,420?,421?/m0/s1
InChIKeyKQPQHXKVPKDBDQ-MICXAZHCSA-N
Roles Classification
Biological Roles:
antisense oligonucleotide  A synthetic oligonucleotide whose base sequence is complementary to a gene's messenger RNA (mRNA) and which will bind with the mRNA inactivating it.
antigen  Any substance that stimulates an immune response in the body, such as through antibody production or by presentation to a T-cell receptor after binding to a major histocompability complex (MHC).
ChEBI Ontology
Outgoing Relation(s)
d(Gs)19dG (CHEBI:76705) has role antigen (CHEBI:59132)
d(Gs)19dG (CHEBI:76705) has role antisense oligonucleotide (CHEBI:76720)
d(Gs)19dG (CHEBI:76705) is a phosphorothioate oligonucleotide (CHEBI:76674)
Synonyms  Source
phosphorothioate-linked 5'-d(GGG GGG GGG GGG GGG GGG GG)-3'ChEBI
[All-PS]-d(GGGGGGGGGGGGGGGGGGGG)ChEBI
[All-PS]-dG20ChEBI
phosphorothioate-linked 5'-d(GGGGGGGGGGGGGGGGGGGG)-3'ChEBI
d[GPSGPSGPSGPSGPSGPSGPSGPSGPSGPSGPSGPSGPSGPSGPSGPSGPSGPSGPSG]ChEBI
Citations