CHEBI:49537 - c-di-GMP

ChEBI IDCHEBI:49537
ChEBI Namec-di-GMP
Stars
DefinitionA cyclic purine dinucleotide that is the 3',5'-cyclic dimer of MP.
Secondary ChEBI IDsCHEBI:47036, CHEBI:49535
Last Modified9 December 2024
SubmitterMarcus Ennis
DownloadsMolfile
FormulaC20H24N10O14P2
Net Charge0
Average Mass690.416
Monoisotopic Mass690.09487
SMILESNc1nc(=O)c2ncn([C@@H]3O[C@@H]4COP(=O)(O)O[C@H]5[C@@H](O)[C@H](n6cnc7c(=O)nc(N)nc76)O[C@@H]5COP(=O)(O)O[C@H]4[C@H]3O)c2n1
InChIInChI=1S/C20H24N10O14P2/c21-19-25-13-7(15(33)27-19)23-3-29(13)17-9(31)11-5(41-17)1-39-45(35,36)44-12-6(2-40-46(37,38)43-11)42-18(10(12)32)30-4-24-8-14(30)26-20(22)28-16(8)34/h3-6,9-12,17-18,31-32H,1-2H2,(H,35,36)(H,37,38)(H3,21,25,27,33)(H3,22,26,28,34)/t5-,6-,9-,10-,11-,12-,17-,18-/m1/s1
InChIKeyPKFDLKSEZWEFGL-MHARETSRSA-N
Roles Classification
Biological Roles:
signalling molecule  A molecular messenger in which the molecule is specifically involved in transmitting information between cells. Such molecules are released from the cell sending the signal, cross over the gap between cells by diffusion, and interact with specific receptors in another cell, triggering a response in that cell by activating a series of enzyme controlled reactions which lead to changes inside the cell.
immunomodulator  Biologically active substance whose activity affects or plays a role in the functioning of the immune system.
Application:
immunomodulator  Biologically active substance whose activity affects or plays a role in the functioning of the immune system.
ChEBI Ontology
Outgoing Relation(s)
c-di-GMP (CHEBI:49537) has role immunomodulator (CHEBI:50846)
c-di-GMP (CHEBI:49537) has role signalling molecule (CHEBI:62488)
c-di-GMP (CHEBI:49537) is a cyclic purine dinucleotide (CHEBI:47037)
c-di-GMP (CHEBI:49537) is a guanyl ribonucleotide (CHEBI:61295)
c-di-GMP (CHEBI:49537) is conjugate acid of c-di-GMP(2−) (CHEBI:58805)
Incoming Relation(s)
c-di-GMP(2−) (CHEBI:58805) is conjugate base of c-di-GMP (CHEBI:49537)
IUPAC Name 
9,9'-[(2R,3R,3aS,7aR,9R,10R,10aS,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one)
Synonyms  Source
bis(3',5')-cyclic diguanylic acidChemIDplus
cyclic diguanylic acidChemIDplus
cyclic-bis(3',5')diguanylic acidChemIDplus
c-(GpGp)ChemIDplus
cGpGpChemIDplus
guanylyl-(3'→5')-3'-guanylic acid, cyclic 3'→5'''-nucleotideChemIDplus
Manual XrefsDatabases
C16463KEGG COMPOUND
C-DI-GMPMetaCyc
Registry NumbersSources
Beilstein:9696190Beilstein
Reaxys:9606190Reaxys
CAS:61093-23-0ChemIDplus
CAS:61093-23-0KEGG COMPOUND
Citations