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CHEBI:2511 - agarose

ChEBI IDCHEBI:2511
ChEBI Nameagarose
Stars
DefinitionA linear polysaccharide made up from alternating D-galactose and 3,6-anhydro-α-L-galactopyranose residues joined by α-(1→3)- and β-(1→4)-linkages.
Last Modified21 July 2015
DownloadsMolfile
Formula(C12H18O9)n.C12H20O10
Net Charge0
Average Mass630.549
Monoisotopic Mass630.20073
SMILES[H][C@]12OC[C@]([H])(O[C@@H](O[C@H]3[C@@H](O)[C@@H](CO)O[C@@H](O[C@H]4[C@@]5([H])OC[C@]4([H])O[C@@H](O)[C@H]5O)[C@@H]3O)[C@H]1O)[C@H]2O[C@@H]1O[C@H](CO)[C@H](O)[C@H](O)[C@H]1O
WURCSWURCS=2.0/2,4,3/[a1221h-1a_1-5_3-6][a2112h-1b_1-5]/1-2-1-2/a4-b1_b3-c1_c4-d1
InChIInChI=1S/C24H38O19/c25-1-5-9(27)11(29)12(30)22(38-5)41-17-8-4-36-20(17)15(33)24(40-8)43-18-10(28)6(2-26)39-23(14(18)32)42-16-7-3-35-19(16)13(31)21(34)37-7/h5-34H,1-4H2/t5-,6-,7+,8+,9+,10+,11+,12-,13+,14-,15+,16-,17-,18+,19+,20+,21-,22+,23+,24+/m1/s1
InChIKeyMJQHZNBUODTQTK-WKGBVCLCSA-N
Wikipedia
Roles Classification
Biological Role:
marine metabolite  Any metabolite produced during a metabolic reaction in marine macro- and microorganisms.
ChEBI Ontology
Outgoing Relation(s)
agarose (CHEBI:2511) has functional parent galactan (CHEBI:37165)
agarose (CHEBI:2511) has role marine metabolite (CHEBI:76507)
agarose (CHEBI:2511) is a polysaccharide (CHEBI:18154)
Incoming Relation(s)
agar (CHEBI:2509) has part agarose (CHEBI:2511)
IUPAC Name 
(1→4)-3,6-anhydro-α-L-galactopyranosyl-(1→3)-β-D-galactopyranan
Synonyms  Source
AgaroseKEGG COMPOUND
[4)-3,6-An-α-L-Galp-(1→3)-β-D-Galp-(1→]nIUBMB
SepharoseChemIDplus
Manual XrefsDatabases
C01399KEGG COMPOUND
AgaroseWikipedia
Registry NumbersSources
CAS:9012-36-6KEGG COMPOUND
CAS:9012-36-6ChemIDplus
Citations