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CHEBI:16704 - uridine

ChEBI IDCHEBI:16704
ChEBI Nameuridine
Stars
DefinitionA ribonucleoside composed of a molecule of uracil attached to a ribofuranose moiety via a β‒N1-glycosidic bond.
Secondary ChEBI IDsCHEBI:9893, CHEBI:15296, CHEBI:27227, CHEBI:46386, CHEBI:46391, CHEBI:46460, CHEBI:46463
Last Modified3 March 2017
DownloadsMolfile
FormulaC9H12N2O6
Net Charge0
Average Mass244.203
Monoisotopic Mass244.06954
SMILESO=c1ccn([C@@H]2O[C@H](CO)[C@@H](O)[C@H]2O)c(=O)n1
InChIInChI=1S/C9H12N2O6/c12-3-4-6(14)7(15)8(17-4)11-2-1-5(13)10-9(11)16/h1-2,4,6-8,12,14-15H,3H2,(H,10,13,16)/t4-,6-,7-,8-/m1/s1
InChIKeyDRTQHJPVMGBUCF-XVFCMESISA-N
Wikipedia
Species of MetaboliteComponentSourceComments
Homo sapiens (ncbitaxon:9606) - DOI (10.1038/nbt.2488)
Daphnia magna (ncbitaxon:35525) - Article (Mixtures of similarly acting compounds in Daphnia magna: From gene to metabolite and beyondTine Vandenbrouck, Oliver A.H. Jones, Nathalie Dom, Julian L. Griffin, Wim De CoenEnvironment International 36 (2010) 254-268)
Saccharomyces cerevisiae (ncbitaxon:4932) - PubMed (24678285) Source: yeast.sf.net
Escherichia coli (ncbitaxon:562) - PubMed (21988831)
Mus musculus (ncbitaxon:10090) - PubMed (19425150) Source: BioModels - MODEL1507180067
Roles Classification
Biological Roles:
human metabolite  Any mammalian metabolite produced during a metabolic reaction in humans (Homo sapiens).
fundamental metabolite  Any metabolite produced by all living cells.
ChEBI Ontology
Outgoing Relation(s)
uridine (CHEBI:16704) has functional parent uracil (CHEBI:17568)
uridine (CHEBI:16704) has role drug metabolite (CHEBI:49103)
uridine (CHEBI:16704) has role fundamental metabolite (CHEBI:78675)
uridine (CHEBI:16704) has role human metabolite (CHEBI:77746)
uridine (CHEBI:16704) is a uridines (CHEBI:27242)
Incoming Relation(s)
(5'S,6'R)-C-glycyluridine zwitterion (CHEBI:195553) has functional parent uridine (CHEBI:16704)
(5'S,6'S)-C-glycyluridine zwitterion (CHEBI:229461) has functional parent uridine (CHEBI:16704)
3'-(enolpyruvyl)uridine 5'-monophosphate (CHEBI:133864) has functional parent uridine (CHEBI:16704)
5-aminomethyl-2-thiouridine (CHEBI:73768) has functional parent uridine (CHEBI:16704)
5'-O-(dihydroxyphosphanyl)-2'-O-{2-[2-(dimethylamino)ethoxy]ethyl}-5-methyluridine (CHEBI:39913) has functional parent uridine (CHEBI:16704)
nikkomycin Z (CHEBI:623918) has functional parent uridine (CHEBI:16704)
uridine-5'-carboxamide (CHEBI:195554) has functional parent uridine (CHEBI:16704)
uridine residue (CHEBI:73747) is substituent group from uridine (CHEBI:16704)
IUPAC Name 
uridine
Synonyms  Source
UridineKEGG COMPOUND
1-β-D-ribofuranosylpyrimidine-2,4(1H,3H)-dioneChEBI
UrdIUBMB
UridinChemIDplus
URIDINEPDBeChem
uChEBI
UniProt Name  Source
uridineUniProt
Manual XrefsDatabases
C00299KEGG COMPOUND
URIPDBeChem
HMDB0000296HMDB
URIDINEMetaCyc
UridineWikipedia
DB02745DrugBank
C00019674KNApSAcK
ECMDB00296ECMDB
YMDB00127YMDB
Registry NumbersSources
Gmelin:397474Gmelin
Reaxys:754904Reaxys
CAS:58-96-8KEGG COMPOUND
CAS:58-96-8ChemIDplus
Citations