Supporting Tools and Websites
Metadata extraction software:
Micro-Meta App: an interactive tool for collecting microscopy metadata based on community specifications Documentation and download here
MethodsJ2: a software tool to capture metadata and generate comprehensive microscopy methods text Documentation and download here
Bia-binder: Run Jupyter Notebooks and experiment directly on the BioImageArchive
QUAREP-LiMi: Quality Assessment and Reproducibility for Instruments & Images in Light Microscopy
In the future, capabilities will be available to connect other added-value resources that aim to enhance the scientific value of the archived images through curation, integrative analysis and the development of new analytical methods. Please write to firstname.lastname@example.org to discuss your ideas or subscribe to the mailing list.