hiding-tiger alpha

Live Cell Segmentation Boundary Model

Constantin Pape

10.5281/zenodo.5869899/6647688

Example image containing both original image data and after applying the model to it.

Model Information

Description: Cell segmentation for phase-contrast microscopy.
Task: 2D cell segmentation
Licence: CC-BY-4.0
Tags: 2D, cells, label free, transmission light microscopy, instance segmentation

Benchmarking

This model was not tested on datasets with reference annotations, so we cannot produce benchmarking metrics.


Model predictions

Study Dataset Original image Prediction Analysis parameters
S-BIAD1466 Nanoscale analysis of human G1 and metaphase chromatin in situ
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z_slices_analysed: 12,13
input_channel_analysed: 1
t_slices_analysed: 0,1
S-BIAD1269 CHO cell mitotic rounding raw brightfield microscopy images (for annotations)
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