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Ligand clusters for UniProt code Q9UKM7

Ligand clusters for Q9UKM7: Endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase from Homo sapiens

Top 6 (of 15) ligand clusters
Cluster 1.
5 ligand types
7 ligands
Cluster 2.
2 ligand types
5 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
2 ligand types
2 ligands
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 1fmiA  
JSmol
 

Structures

PDB   Schematic diagram
1fmiA    
1fo2A    
1x9dA    
5kk7A    
5kijA    
 more ...

 

 Cluster 1 contains 5 ligand types

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Ligand Description


 
1. Ligand: DMJ × 1
1-Deoxymannojirimycin
PDB code: 1fo2(A).


 
2. Ligand: KIF × 1
Kifunensine
PDB code: 1fo3(A).


 
3. Ligand: BU1 × 2
1,4-Butanediol
PDB codes: 5kij(A), 5kk7(A).


 
4. Ligand: Z5L-MAN × 2
Z5L=Methyl 2-Thio-Alpha-D-Mannopyranoside, MAN=Alpha-D-Mannopyranose.
PDB codes: 1x9d(A), 5kk7(A).


 
5. Ligand: NAG-BMA-MAN-MAN-MAN-MAN-MAN-MAN-MAN × 1
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose, MAN=Alpha-D-Mannopyranose.
PDB code: 5kij(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: SO4 × 3
Sulfate ion
PDB codes: 1fo2(A), 1fo3(A), 1fmi(A).


 
2. Ligand: 1PS × 2
3-Pyridinium-1-Ylpropane-1-Sulfonate
PDB codes: 5kij(A), 5kk7(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: 1PS × 1
3-Pyridinium-1-Ylpropane-1-Sulfonate
PDB code: 5kk7(A).

 

 Cluster 4 contains 2 ligand types

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Ligand Description


 
1. Ligand: ACT × 1
Acetate ion
PDB code: 5kk7(A).


 
2. Ligand: BU1 × 1
1,4-Butanediol
PDB code: 5kij(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: BU1 × 1
1,4-Butanediol
PDB code: 5kij(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: BU1 × 1
1,4-Butanediol
PDB code: 5kij(A).

 

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