Ligand clusters for UniProt code Q9HD26

Ligand clusters for Q9HD26: Golgi-associated PDZ and coiled-coil motif-containing protein from Homo sapiens

		Top 6 (of 9) ligand clusters Cluster 1. 33 ligand types 42 ligands Cluster 2. 5 ligand types 6 ligands Cluster 3. 2 ligand types 2 ligands Cluster 4. 1 ligand type 7 ligands Cluster 5. 1 ligand type 11 ligands Cluster 6. 1 ligand type 9 ligands
Representative protein: 4e34A

Structures

PDB		Schematic diagram
4e34A
4k72A
4k78A
2lobA
5k4fA
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Cluster 1 contains 33 ligand types (of which only 20 are listed. Click for all)

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Ligand		Description
		1. Ligand: GOL × 9 glycerin Glycerol PDB codes: 4e34(A), 4e35(A), 4jof(A), 4jog(A), 4joj(A), 4jok(A),
		2. Ligand: GLN × 1 l-glutamine PDB code: 4k78(A).
		3. Ligand: VAL × 1 valine PDB code: 4jor(A).
		4. Ligand: ARG-ARG-GLU-THR-GLN-VAL × 2 PDB codes: 5ic3(A), 5k4f(A).
		5. Ligand: ALA-ASN-SER-ARG-ALA-PRO-THR-SER-ILE-ILE × 1 PDB code: 4joe(A).
		6. Ligand: ALA-ASN-SER-ARG-ALY-PRO-THR-SER-ILE-ILE × 1 ALY=N(6)-Acetyllysine. PDB code: 4nmr(A).
		7. Ligand: ALA-ASN-SER-ARG-TRP × 1 PDB code: 4k78(A).
		8. Ligand: ALA-ASN-SER-ARG-TRP-ALY-THR-SER-ILE-ILE × 1 ALY=N(6)-Acetyllysine. PDB code: 4nmq(A).
		9. Ligand: ALA-ASN-SER-ARG-TRP-PRO-THR-SER-ILE-ILE × 1 PDB code: 4e34(A).
		10. Ligand: ARG-LEU-GLN-ARG-ARG-ARG-GLU-THR-GLN × 1 PDB code: 4jor(A).
		11. Ligand: ARG-LEU-PRO-THR-SER-ILE-ILE × 1 PDB code: 4jof(A).
		12. Ligand: ARG-TRP-GLN-ASP-THR-ARG-LEU × 1 PDB code: 4k75(A).
		13. Ligand: ARG-TRP-PRO-THR-SER-ALY-ILE × 1 ALY=N(6)-Acetyllysine. PDB code: 4nmo(A).
		14. Ligand: ARG-TRP-PRO-THR-SER-FAK-ILE × 1 FAK=N~6~-(Trifluoroacetyl)-L-Lysine. PDB code: 4nmt(A).
		15. Ligand: ARG-TRP-PRO-THR-SER-ILE-LEU × 1 PDB code: 4e35(A).
		16. Ligand: ASN-SER-ARG-TRP-GLN-VAL-THR-ARG-VAL × 1 PDB code: 6ov7(A).
		17. Ligand: ASN-SER-ARG-TYR-PRO-THR-SER-ILE-ILE × 1 PDB code: 4jok(A).
		18. Ligand: ASP-SER-ILE-ILE × 1 PDB code: 4k72(A).
		19. Ligand: ASP-THR-ARG-LEU × 1 PDB code: 4k78(A).
		20. Ligand: GLU-GLU-VAL-GLN-ASP-THR-ARG-LEU × 1 PDB code: 2lob(A).
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Cluster 2 contains 5 ligand types

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Ligand		Description
		1. Ligand: GLU-THR-GLN-VAL × 2 PDB codes: 5ic3(A), 5k4f(A).
		2. Ligand: ARG-GLU-THR-GLN-VAL × 1 PDB code: 4jor(A).
		3. Ligand: ARG-HIS-PRO-THR-SER-ILE-ILE × 1 PDB code: 4joh(A).
		4. Ligand: ASN-SER-ARG-VAL-GLN-ASP-SER-ILE-ILE × 1 PDB code: 4k72(A).
		5. Ligand: THR-ARG-ARG-GLU-THR-GLN-LEU × 1 PDB code: 4jop(A).

Cluster 3 contains 2 ligand types

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Ligand		Description
		1. Ligand: PQR × 1 4-[Methyl(nitroso)amino]benzene-1,2-Diol PDB code: 5ic3(A).
		2. Ligand: SO3 × 1 Sulfite ion PDB code: 4q6h(A).

Cluster 4 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 7 glycerin Glycerol PDB codes: 4e34(A), 4joe(A), 4jog(A), 4joj(A), 4k6y(A), 4nms(A), 6v84(A).

Cluster 5 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 11 glycerin Glycerol PDB codes: 4e35(A), 4joe(A), 4jor(A), 4k6y(A), 4nmo(A), 4nmp(A), 4nmq(A), 4nms(A), 4nmt(A), 4nmv(A), 6v84(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 9 glycerin Glycerol PDB codes: 4e35(A), 4jof(A), 4jok(A), 4nmo(A), 4nmp(A), 4nmq(A), 4nmt(A), 4nmv(A).