Ligand clusters for UniProt code Q82134

Ligand clusters for Q82134: Protease (Fragment) from Human T-cell leukemia virus type I

		Top 6 (of 11) ligand clusters Cluster 1. 8 ligand types 8 ligands Cluster 2. 3 ligand types 4 ligands Cluster 3. 1 ligand type 1 ligand Cluster 4. 1 ligand type 1 ligand Cluster 5. 1 ligand type 2 ligands Cluster 6. 1 ligand type 1 ligand
Representative protein: 3linA

Structures

PDB		Schematic diagram
3linA
3liqA
3lixA
3litA
4ydfA
		more ...

Cluster 1 contains 8 ligand types

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Ligand		Description
		1. Ligand: MK1 × 1 indinavir N-[2(r)-Hydroxy-1(s)-Indanyl]-5-[(2(s)-Tertiary butylaminocarbonyl)-4(3-Pyridylmethyl)piperazino]- 4(s)-Hydroxy-2(r)-Phenylmethylpentanamide PDB code: 3wsj(A).
		2. Ligand: 4B1 × 1 N-Benzyl-N-[(3s,4s)-4-{Benzyl[(4-Nitrophenyl) sulfonyl]amino}pyrrolidin-3-Yl]-3- Nitrobenzenesulfonamide PDB code: 4ydf(A).
		3. Ligand: ALA-PRO-GLN-VAL-STA-VAL-MET-HIS-PRO × 1 STA=Statine. PDB code: 3liy(A).
		4. Ligand: E13 × 1 N-[(2s,3s)-4-{(4r)-4-[(2,2-Dimethylpropyl)carbamoyl]-5, 5-Dimethyl-1,3-Thiazolidin-3-Yl}-3-Hydroxy- 4-Oxo-1- Phenylbutan-2-Yl]-N~2~-{(2s)-2-[(Methoxycarbonyl) amino]-2-Phenylacetyl}-3-Methyl-L- Valinamide PDB code: 3lin(A).
		5. Ligand: E14 × 1 (4r)-3-[(2s,3s)-3-[[(2s)-2-[[(2s)-2-Azanyl-2-Phenyl- Ethanoyl]amino]-3,3-Dimethyl-Butanoyl]amino]- 2- Hydroxy-4-Phenyl-Butanoyl]-5,5-Dimethyl-N-(2- Methylpropyl)-1,3-Thiazolidine-4-Carboxamide PDB code: 3liq(A).
		6. Ligand: E15 × 1 (4r)-3-[(2s,3s)-3-[[(2s)-2-[[(2s)-2-Azanyl-2-Phenyl- Ethanoyl]amino]-3,3-Dimethyl-Butanoyl]amino]- 2- Hydroxy-4-Phenyl-Butanoyl]-5,5-Dimethyl-N-[(2r)-3- Methylbutan-2-Yl]-1,3-Thiazolidine-4- Carboxamide PDB code: 3lit(A).
		7. Ligand: E16 × 1 (4r)-3-[(2s,3s)-3-[[(2s)-2-[[(2s)-2-Azanyl-2-Phenyl- Ethanoyl]amino]-3,3-Dimethyl-Butanoyl]amino]- 2- Hydroxy-4-Phenyl-Butanoyl]-N-[(2r)-3,3-Dimethylbutan- 2-Yl]-5,5-Dimethyl-1,3-Thiazolidine-4- Carboxamide PDB code: 3liv(A).
		8. Ligand: E17 × 1 N-{(1s,2s)-1-Benzyl-3-[(4r)-5,5-Dimethyl-4-{[(1r)-1,2, 2-Trimethylpropyl]carbamoyl}-1,3- Thiazolidin-3-Yl]-2- Hydroxy-3-Oxopropyl}-3-Methyl-N~2~-{(2s)-2- [(Morpholin-4-Ylacetyl)amino]-2- Phenylacetyl}-L- Valinamide PDB code: 3lix(A).

Cluster 2 contains 3 ligand types

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Ligand		Description
		1. Ligand: SO4 × 2 Sulfate ion PDB codes: 3wsj(A),
		2. Ligand: PEG × 1 Di(hydroxyethyl)ether PDB code: 3liy(A).
		3. Ligand: PG4 × 1 Tetraethylene glycol PDB code: 3wsj(A).

Cluster 3 contains 1 ligand type

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Ligand		Description
		1. Ligand: SO4 × 1 Sulfate ion PDB code: 3wsj(A).

Cluster 4 contains 1 ligand type

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Ligand		Description
		1. Ligand: SO4 × 1 Sulfate ion PDB code: 3wsj(A).

Cluster 5 contains 1 ligand type

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Ligand		Description
		1. Ligand: SO4 × 2 Sulfate ion PDB codes: 3wsj(A), 4ydf(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: SO4 × 1 Sulfate ion PDB code: 3wsj(A).