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Ligand clusters for UniProt code Q75WH8
Ligand clusters for Q75WH8: L-rhamnose isomerase from Pseudomonas stutzeri
4 ligand clusters
Cluster 1.
8 ligand types
16 ligands
Cluster 2.
9 ligand types
52 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
2 ligands
Representative protein: 2hcvA
Structures
PDB
Schematic diagram
2hcv
A
3itl
A
3m0v
A
4gji
A
3m0x
A
more ...
Cluster 1 contains 8 ligand types
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Ligand
Description
1. Ligand:
RNS × 6
L-Rhamnose
PDB codes:
2i56
(A),
3itt
(A),
3m0h
(A),
3m0v
(A),
3m0y
(A),
4gji
(A).
2. Ligand:
PSJ × 3
D-Psicose
PDB codes:
3itv
(A),
3m0l
(A),
3m0x
(A).
3. Ligand:
AOS × 2
D-Allose
PDB codes:
2i57
(A),
3m0m
(A).
4. Ligand:
AFD × 1
Alpha-D-Allopyranose
PDB code:
4gjj
(A).
5. Ligand:
LRH × 1
6-Deoxy-Beta-L-Fructofuranose
PDB code:
3itl
(A).
6. Ligand:
PSV × 1
Alpha-D-Psicofuranose
PDB code:
3ito
(A).
7. Ligand:
RAM × 1
Alpha-L-Rhamnopyranose
PDB code:
4gji
(A).
8. Ligand:
RM4 × 1
Beta-L-Rhamnopyranose
PDB code:
4gji
(A).
Cluster 2 contains 9 ligand types
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Ligand
Description
_Mn
1. Metal:
_MN × 26
PDB codes:
3itl
(A),
3ito
(A),
3itt
(A),
3itv
(A),
3itx
(A),
3m0h
(A),
3m0l
(A),
3m0m
(A),
3m0v
(A),
3m0x
(A),
3m0y
(A),
4gji
(A),
4gjj
(A),
_Zn
2. Metal:
_ZN × 8
PDB codes:
2hcv
(A),
2i56
(A),
2i57
(A),
3iui
(A),
3. Ligand:
RNS × 6
L-Rhamnose
PDB codes:
2i56
(A),
3itt
(A),
3m0h
(A),
3m0v
(A),
3m0y
(A),
4gji
(A).
4. Ligand:
AOS × 3
D-Allose
PDB codes:
2i57
(A),
3m0m
(A),
4gjj
(A).
5. Ligand:
PSJ × 3
D-Psicose
PDB codes:
3itv
(A),
3m0l
(A),
3m0x
(A).
_Co
6. Metal:
_CO × 2
PDB codes:
3iuh
(A),
_Cu
7. Metal:
_CU × 2
PDB codes:
3iud
(A),
8. Ligand:
LRH × 1
6-Deoxy-Beta-L-Fructofuranose
PDB code:
3itl
(A).
9. Ligand:
PSV × 1
Alpha-D-Psicofuranose
PDB code:
3ito
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
RAM × 1
Alpha-L-Rhamnopyranose
PDB code:
4gji
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
_Mn
1. Metal:
_MN × 2
PDB codes:
4gji
(A),
4gjj
(A).