Ligand clusters for UniProt code Q67PY4

Ligand clusters for Q67PY4: Putative sphingosine-1-phosphate lyase from Symbiobacterium thermophilum (strain T / IAM 14863)

		4 ligand clusters Cluster 1. 5 ligand types 10 ligands Cluster 2. 4 ligand types 10 ligands Cluster 3. 1 ligand type 1 ligand Cluster 4. 1 ligand type 1 ligand
Representative protein: 5eudA

Structures

PDB		Schematic diagram
5eudA
5eueA
3mauA
3mafA
3mbbA
		more ...

Cluster 1 contains 5 ligand types

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Ligand		Description
		1. Ligand: PO4 × 6 Phosphate ion PDB codes: 3mad(A), 3maf(A), 3mbb(A), 5eud(A), 5eue(A).
		2. Ligand: 5S5 × 1 ~{N}-[(1~{s})-2-[(4-Methoxy-2,5-Dimethyl-Phenyl) methylamino]-1-Phenyl-Ethyl]-5-Methyl-1,2-Oxazole- 3- Carboxamide PDB code: 5eue(A).
		3. Ligand: 5S6 × 1 ~{N}-[(1~{s})-2-[(4-Methoxy-2,5-Dimethyl-Phenyl) methylamino]-1-[4-(3-Oxidanylprop-1- Ynyl) phenyl]ethyl]-5-Methyl-1,2-Oxazole-3-Carboxamide PDB code: 5eud(A).
		4. Ligand: EXT × 1 {5-Hydroxy-6-Methyl-4-[(E)-{[2-(Phosphonooxy) ethyl]imino}methyl]pyridin-3- Yl}methyl dihydrogen phosphate PDB code: 3mau(A).
_Cl		5. Metal: _CL × 1 PDB code: 3maf(B).

Cluster 2 contains 4 ligand types

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Ligand		Description
		1. Ligand: PO4 × 7 Phosphate ion PDB codes: 3mad(A), 3maf(B), 3mau(A), 3mbb(A), 5eud(A), 5eue(A).
		2. Ligand: 5S5 × 1 ~{N}-[(1~{s})-2-[(4-Methoxy-2,5-Dimethyl-Phenyl) methylamino]-1-Phenyl-Ethyl]-5-Methyl-1,2-Oxazole- 3- Carboxamide PDB code: 5eue(A).
		3. Ligand: 5S6 × 1 ~{N}-[(1~{s})-2-[(4-Methoxy-2,5-Dimethyl-Phenyl) methylamino]-1-[4-(3-Oxidanylprop-1- Ynyl) phenyl]ethyl]-5-Methyl-1,2-Oxazole-3-Carboxamide PDB code: 5eud(A).
		4. Ligand: PLR × 1 (5-Hydroxy-4,6-Dimethylpyridin-3-Yl)methyl dihydrogen phosphate PDB code: 3mau(A).

Cluster 3 contains 1 ligand type

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Ligand		Description
		1. Ligand: EDO × 1 1,2-Ethanediol PDB code: 3mbb(A).

Cluster 4 contains 1 ligand type

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Ligand		Description
_Na		1. Metal: _NA × 1 PDB code: 3mbb(A).