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Ligand clusters for UniProt code Q56839
Ligand clusters for Q56839: 2-oxopropyl-CoM reductase, carboxylating from Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2)
5 ligand clusters
Cluster 1.
3 ligand types
7 ligands
Cluster 2.
1 ligand type
5 ligands
Cluster 3.
4 ligand types
6 ligands
Cluster 4.
4 ligand types
6 ligands
Cluster 5.
1 ligand type
1 ligand
Representative protein: 1mo9A
Structures
PDB
Schematic diagram
1mo9
A
2c3d
A
3q6j
A
2c3c
A
1mok
A
Cluster 1 contains 3 ligand types
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Ligand
Description
1. Ligand:
NAP × 1
Nadp nicotinamide-Adenine-Dinucleotide phosphate
PDB code:
2c3c
(A).
2. Ligand:
FAD × 5
flavin adenine dinucleotide
Flavin-Adenine dinucleotide
PDB codes:
1mo9
(A),
1mok
(A),
2c3c
(A),
2c3d
(A),
3q6j
(A).
3. Ligand:
NAP × 1
Nadp nicotinamide-Adenine-Dinucleotide phosphate
PDB code:
3q6j
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
FAD × 5
flavin adenine dinucleotide
Flavin-Adenine dinucleotide
PDB codes:
1mo9
(A),
1mok
(A),
2c3c
(A),
2c3d
(A),
3q6j
(A).
Cluster 3 contains 4 ligand types
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Ligand
Description
1. Ligand:
KPC × 1
(2-[2-Ketopropylthio]ethanesulfonate
PDB code:
1mo9
(A).
2. Ligand:
COM × 2
coenzyme m
1-Thioethanesulfonic acid
PDB codes:
2c3c
(A),
2c3d
(A).
3. Ligand:
ACN × 2
Acetone
PDB codes:
2c3c
(A),
3q6j
(A).
4. Ligand:
BCT × 1
Bicarbonate ion
PDB code:
3q6j
(A).
Cluster 4 contains 4 ligand types
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Ligand
Description
1. Ligand:
KPC × 1
(2-[2-Ketopropylthio]ethanesulfonate
PDB code:
1mo9
(A).
2. Ligand:
COM × 3
coenzyme m
1-Thioethanesulfonic acid
PDB codes:
2c3c
(A),
2c3d
(A),
3. Ligand:
ACN × 1
Acetone
PDB code:
2c3c
(A).
4. Ligand:
KPC × 1
(2-[2-Ketopropylthio]ethanesulfonate
PDB code:
3q6j
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
_Mg
1. Metal:
_MG × 1
PDB code:
3q6j
(A).